RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 FAM151AQ8WW52 585 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.17■□□□□ 0.18
CIITA-204ENST00000570546 TYW5A2RUC4 315 aaKnown RBP16.17■□□□□ 0.18
CIITA-204ENST00000570546 LCP1P13796 627 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 Q4G0T1 1027 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 ITPRIPL1Q6GPH6 555 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 SH3RF1Q7Z6J0 888 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
CIITA-204ENST00000570546 RANBP17Q9H2T7 1088 aaKnown RBP16.17■□□□□ 0.18
CIITA-204ENST00000570546 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 SREBF1P36956 1147 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 ZNF200P98182 395 aaPredicted RBP16.17■□□□□ 0.18
CIITA-204ENST00000570546 TXNRD3Q86VQ6 643 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 SLC26A7Q8TE54 656 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
CIITA-204ENST00000570546 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
CIITA-204ENST00000570546 FEZF2Q8TBJ5 459 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
CIITA-204ENST00000570546 CCND1P24385 295 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 EEF1B2P24534 225 aaKnown RBP16.16■□□□□ 0.18
CIITA-204ENST00000570546 COG2Q14746 738 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 MDH1BQ5I0G3 518 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 RAB6BQ9NRW1 208 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 PDGFRAP16234 1089 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 KDSRQ06136 332 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 CCDC138Q96M89 665 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 KIFC3Q9BVG8 833 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 TRPV6Q9H1D0 765 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 CHMP2BQ9UQN3 213 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
CIITA-204ENST00000570546 PTK7Q13308 1070 aa16.16■□□□□ 0.18
CIITA-204ENST00000570546 MRPL40Q9NQ50 206 aaKnown RBP16.16■□□□□ 0.18
CIITA-204ENST00000570546 F8VZ95 297 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 AKAP3O75969 853 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 APRTP07741 180 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 NFX1Q12986 1120 aaKnown RBP16.15■□□□□ 0.18
CIITA-204ENST00000570546 CUL3Q13618 768 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
CIITA-204ENST00000570546 LVRNQ6Q4G3 990 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 ACAP3Q96P50 834 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 MRPL46Q9H2W6 279 aaKnown RBP16.15■□□□□ 0.18
CIITA-204ENST00000570546 ZNF446Q9NWS9 450 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 HIC1Q14526 733 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 TWF2Q6IBS0 349 aaKnown RBP16.15■□□□□ 0.18
CIITA-204ENST00000570546 C3orf62Q6ZUJ4 267 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 OSGEPQ9NPF4 335 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 AGAP1Q9UPQ3 857 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 PPFIA2O75334 1257 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 GTF2H1P32780 548 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 TTC8Q8TAM2 541 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 TEX13BQ9BXU2 312 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 APOEP02649 317 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 ZFATQ9P243 1243 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 PPP1R12AO14974 1030 aaPredicted RBP16.15■□□□□ 0.18
CIITA-204ENST00000570546 RFC5P40937 340 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 POU5F1BQ06416 359 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 GPAT2Q6NUI2 795 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 THEM5Q8N1Q8 247 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 ATXN7L3BQ96GX2 97 aa16.15■□□□□ 0.18
CIITA-204ENST00000570546 RASSF10A6NK89 507 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 CAND2O75155 1236 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 MUTP22033 750 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 SESN2P58004 480 aaPredicted RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 PHEXP78562 749 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ICA1LQ8NDH6 482 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 CACYBPQ9HB71 228 aaKnown RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 PSTPIP1O43586 416 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 RGS7P49802 495 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ITIH4Q14624 930 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 MEA1Q16626 185 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 VGLL2Q8N8G2 317 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ABTB1Q969K4 478 aaPredicted RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 ADA2Q9NZK5 511 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 NVLO15381 856 aaKnown RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 GPR162Q16538 588 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 ANO5Q75V66 913 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 TSTA3Q13630 321 aaPredicted RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 LRRC23Q53EV4 343 aaPredicted RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 AGR3Q8TD06 166 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 DTX3LQ8TDB6 740 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 KLF6Q99612 283 aaPredicted RBP16.14■□□□□ 0.17
CIITA-204ENST00000570546 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 SUN2Q9UH99 717 aa16.14■□□□□ 0.17
CIITA-204ENST00000570546 TNS2Q63HR2 1409 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 SETSIPP0DME0 302 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 STX3Q13277 289 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 MORF4L2Q15014 288 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 SMTNL2Q2TAL5 461 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms