RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ITGA11Q9UKX5 1188 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 UBQLN1Q9UMX0 589 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 DERAQ9Y315 318 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 WDR81Q562E7 1941 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 TTC26A0AVF1 554 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ARL5CA6NH57 179 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 C9IYK1 514 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF623O75123 536 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ADCY5O95622 1261 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 FGBP02675 491 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 PTMAP06454 111 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 THP07101 528 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ACRP10323 421 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ITGB8P26012 769 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 SCNN1GP51170 649 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF75DP51815 510 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 WDR5P61964 334 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 DLG4P78352 724 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 KCNC4Q03721 635 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 MYO1EQ12965 1108 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF699Q32M78 642 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 SLC10A6Q3KNW5 377 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 MIIPQ5JXC2 388 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 GBP6Q6ZN66 633 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 PPFIBP1Q86W92 1011 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 HELQQ8TDG4 1101 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 IQCDQ96DY2 449 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 MRFAP1L1Q96HT8 127 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 GAD1Q99259 594 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 LSM14BQ9BX40 385 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 INTS13Q9NVM9 706 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 KANSL3Q9P2N6 904 aa7.1□□□□□ -1.27
CTDNEP1-204ENST00000570484 CENPFP49454 3210 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SMIM28A0A1B0GU29 152 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 A0A1W2PQC6 194 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 GTPBP10A4D1E9 387 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TBKBP1A7MCY6 615 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 ENPP3O14638 875 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 UPP2O95045 317 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 HLA-DRAP01903 254 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 ITGB3P05106 788 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 FGFR1P11362 822 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 P4HA1P13674 534 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 KCNE1P15382 129 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 JUNDP17535 347 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CYP3A5P20815 502 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 RFX1P22670 979 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CDC25BP30305 580 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 POLR2BP30876 1174 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 PNPLA4P41247 253 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TNNC1P63316 161 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 PPP3CAQ08209 521 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 NCOA4Q13772 614 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SYCP1Q15431 976 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZACNQ401N2 412 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CBWD6Q4V339 395 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 NOMO2Q5JPE7 1267 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CBWD3Q5JTY5 395 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CBWD5Q5RIA9 395 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SPOUT1Q5T280 376 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TDRD10Q5VZ19 366 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SPECC1LQ69YQ0 1117 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 FAM117BQ6P1L5 589 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 AGMOQ6ZNB7 445 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 OTOP2Q7RTS6 562 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CACNA2D4Q7Z3S7 1137 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMC6Q7Z403 805 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 MRPL10Q7Z7H8 261 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 EFCAB13Q8IY85 973 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF397Q8NF99 534 aaPredicted RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 PLEKHO2Q8TD55 490 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 FAM81BQ96LP2 452 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 UROC1Q96N76 676 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 NT5C1BQ96P26 610 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 YME1L1Q96TA2 773 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 POP1Q99575 1024 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 CRACR2AQ9BSW2 395 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM117Q9H0C3 514 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 INTS2Q9H0H0 1204 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 FAM207AQ9NSI2 230 aaPredicted RBP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 RAB20Q9NX57 234 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 DPP3Q9NY33 737 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 TUBGCP4Q9UGJ1 667 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 DAAM1Q9Y4D1 1078 aa7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.09□□□□□ -1.27
CTDNEP1-204ENST00000570484 PTPRJQ12913 1337 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ITIH6Q6UXX5 1313 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 MYH11P35749 1972 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ARHGEF37A1IGU5 675 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 CARNS1A5YM72 827 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 CASTOR2A6NHX0 329 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms