RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 DAB2IPQ5VWQ8 1189 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 GPIHBP1Q8IV16 184 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 NOSTRINQ8IVI9 506 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 FAM20AQ96MK3 541 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLC26A6Q9BXS9 759 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 RNF26Q9BY78 433 aaPredicted RBP11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 DUSP15Q9H1R2 295 aaPredicted RBP11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZSWIM4Q9H7M6 989 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 ANO2Q9NQ90 1003 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 FREM2Q5SZK8 3169 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 CITO14578 2027 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 LNP1A1A4G5 178 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 ZIC2O95409 532 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PRKCBP05771 671 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 CSRP1P21291 193 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PI4KAP42356 2102 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 CYP4A11Q02928 519 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 INF2Q27J81 1249 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 SOWAHCQ53LP3 525 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 GLRA4Q5JXX5 417 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 IQCEQ6IPM2 695 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 ELMOD1Q8N336 334 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 HAS1Q92839 578 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 ZFYVE19Q96K21 471 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 ZNF512Q96ME7 567 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 GPR88Q9GZN0 384 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 FZD8Q9H461 694 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 PDZD7Q9H5P4 517 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 DENND4CQ5VZ89 1909 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
CTDNEP1-202ENST00000570380 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 DGAT1O75907 488 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 SLITRK3O94933 977 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 CAVIN2O95810 425 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 CPA1P15085 419 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 CREB5Q02930 508 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 TWF1Q12792 350 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 NPY5RQ15761 445 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 KIAA1211LQ6NV74 962 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 Q6ZUG5 572 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 TPH2Q8IWU9 490 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 BLIDQ8IZY5 108 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 POLR3FQ9H1D9 316 aaPredicted RBP11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 SLITRK6Q9H5Y7 841 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 ASAH2Q9NR71 780 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 PRMT7Q9NVM4 692 aaPredicted RBP11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 USP20Q9Y2K6 914 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 GDAQ9Y2T3 454 aa11.51□□□□□ -0.57
CTDNEP1-202ENST00000570380 PTPRDP23468 1912 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 BCLAF3A2AJT9 711 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 CDX4O14627 284 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 N4BP3O15049 544 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 DCLK1O15075 740 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 HYAL3O43820 417 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 IFNAR1P17181 557 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 FGD1P98174 961 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 TNK2Q07912 1038 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 FAM187BQ17R55 369 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 ARHGAP29Q52LW3 1261 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 STXBP5Q5T5C0 1151 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 EEF1DP3Q658K8 133 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 TPGS2Q68CL5 300 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 BRF1Q92994 677 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 UROC1Q96N76 676 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 TMEM9BQ9NQ34 198 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 NEUROG3Q9Y4Z2 214 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 CACNA1EQ15878 2313 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 TNRC6BQ9UPQ9 1833 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
CTDNEP1-202ENST00000570380 A0A087WWV3 80 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 A0A1W2PRU2 124 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 EDN1P05305 212 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 SOX4Q06945 474 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms