RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 NAGPAQ9UK23 515 aa11.81□□□□□ -0.52
NPLOC4-203ENST00000570300 NOCTQ9UK39 431 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-203ENST00000570300 NUB1Q9Y5A7 615 aa11.81□□□□□ -0.52
NPLOC4-203ENST00000570300 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
NPLOC4-203ENST00000570300 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.524e-9■■■□□ 15.9
NPLOC4-203ENST00000570300 XPOTO43592 962 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 RECQL4O94761 1208 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 CKBP12277 381 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 GZMAP12544 262 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 SKIP12755 728 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 MAGEA1P43355 309 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 MYL6P60660 151 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 YWHAEP62258 255 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 ARID5AQ03989 594 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 TCEAL1Q15170 157 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 FAM126BQ8IXS8 530 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 ZNF333Q96JL9 665 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 C16orf45Q96MC5 204 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 AGPAT1Q99943 283 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 PI4K2AQ9BTU6 479 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 BCO2Q9BYV7 579 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 AGO3Q9H9G7 860 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 PADI3Q9ULW8 664 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 IPPQ9Y573 584 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 PAXBP1Q9Y5B6 917 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 PCDHB2Q9Y5E7 798 aa11.8□□□□□ -0.52
NPLOC4-203ENST00000570300 TRIP11Q15643 1979 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 SMIM28A0A1B0GU29 152 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 INPPL1O15357 1258 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 KIF5CO60282 957 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 P4HA1P13674 534 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 CYP11B1P15538 503 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 CDR2Q01850 454 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 CYP27A1Q02318 531 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 PAK2Q13177 524 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 MTFR1Q15390 333 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ZNF699Q32M78 642 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ZNF618Q5T7W0 954 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 KIAA1328Q86T90 577 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 BEST2Q8NFU1 509 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 FAM84AQ96KN4 292 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 ZMAT2Q96NC0 199 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 TOX2Q96NM4 488 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 LACRTQ9GZZ8 138 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 TRPV6Q9H1D0 765 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 GIT1Q9Y2X7 761 aa11.79□□□□□ -0.52
NPLOC4-203ENST00000570300 BRCA2P51587 3418 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 A0A0A6YYK5 440 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PIRO00625 290 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 CYP26A1O43174 497 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 SGPL1O95470 568 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 ITGB3P05106 788 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 CTSHP09668 335 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 COL6A1P12109 1028 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 CHRNB2P17787 502 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 TNFAIP3P21580 790 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 LRPAP1P30533 357 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PNPLA4P41247 253 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 ASPAP45381 313 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 BFSP2Q13515 415 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 CCDC122Q5T0U0 273 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 SPOPLQ6IQ16 392 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 LIMS2Q7Z4I7 341 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms