RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 LRPAP1P30533 357 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 ERGIC2Q96RQ1 377 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 PDE4DIPQ5VU43 2346 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 PODXLO00592 558 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 RPL9P32969 192 aaKnown RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 APBA1Q02410 837 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 LRMPQ12912 555 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 CMTR2Q8IYT2 770 aaKnown RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 SIK3Q9Y2K2 1263 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 RANBP2P49792 3224 aaKnown RBP13.28□□□□□ -0.28
NUP93-220ENST00000569842 COL4A6Q14031 1691 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 PIRO00625 290 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 TLL1O43897 1013 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 IGFBP6P24592 240 aaPredicted RBP13.27□□□□□ -0.28
NUP93-220ENST00000569842 OR1G1P47890 313 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.28
NUP93-220ENST00000569842 UPP1Q16831 310 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 FAM109BQ6ICB4 259 aaPredicted RBP13.27□□□□□ -0.28
NUP93-220ENST00000569842 TRIM65Q6PJ69 517 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.28
NUP93-220ENST00000569842 HPDLQ96IR7 371 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 UROC1Q96N76 676 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 RAD9AQ99638 391 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 LSM14BQ9BX40 385 aaKnown RBP13.27□□□□□ -0.28
NUP93-220ENST00000569842 IMPG2Q9BZV3 1241 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.28
NUP93-220ENST00000569842 PTPRSQ13332 1948 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 PBX1P40424 430 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 CWH43Q9H720 699 aa13.27□□□□□ -0.29
NUP93-220ENST00000569842 FAM207AQ9NSI2 230 aaPredicted RBP13.27□□□□□ -0.29
NUP93-220ENST00000569842 GRXCR1A8MXD5 290 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 RABGGTBP53611 331 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 MYO1EQ12965 1108 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 LRRC52Q8N7C0 313 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 C3orf58Q8NDZ4 430 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 MRPL42Q9Y6G3 142 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 FNDC1Q4ZHG4 1894 aaPredicted RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 TDRD15B5MCY1 1934 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 F8W810 466 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 B3GAT3O94766 335 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 ALDH2P05091 517 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 ATICP31939 592 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 PBX3P40426 434 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 SLC11A1P49279 550 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 NOP14P78316 857 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 TATDN2Q93075 761 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 NRP1O14786 923 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 SPTLC1O15269 473 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 BMP8BP34820 402 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 BCAR1P56945 870 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 PHLDB3Q6NSJ2 640 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 DCLRE1AQ6PJP8 1040 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 VSTM4Q8IW00 320 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 HASPINQ8TF76 798 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 TAF4BQ92750 862 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
NUP93-220ENST00000569842 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 NUB1Q9Y5A7 615 aa13.26□□□□□ -0.29
NUP93-220ENST00000569842 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 NT5C1B-RDH14C9J2C7 533 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 KIF4AO95239 1232 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 GALTP07902 379 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 PNPLA4P41247 253 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
NUP93-220ENST00000569842 TAF6P49848 677 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 LILRA4P59901 499 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 ARHGEF19Q8IW93 802 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 FIBCD1Q8N539 461 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 EPHB6O15197 1021 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 ITGB1P05556 798 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 KLHDC7AQ5VTJ3 777 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 RRAGAQ7L523 313 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 PPM1KQ8N3J5 372 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms