RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 XRCC6P12956 609 aaKnown RBP eCLIP12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RFX1P22670 979 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 OR1D2P34982 312 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CCR2P41597 374 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BRCC3P46736 316 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PRKCQQ04759 706 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TRIM29Q14134 588 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 UPP1Q16831 310 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZNF528Q3MIS6 628 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PABPC1LQ4VXU2 614 aaKnown RBP12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TSSK4Q6SA08 328 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TAS1R3Q7RTX0 852 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 C8orf76Q96K31 380 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CDY1Q9Y6F8 540 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TPRP12270 2363 aaKnown RBP12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FRYQ5TBA9 3013 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TSC2P49815 1807 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ARHGEF37A1IGU5 675 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 WDR27A2RRH5 827 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MARCH6O60337 910 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MOSPD3O75425 235 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RHOP08100 348 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CYP11B2P19099 503 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ROR1Q01973 937 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RESTQ13127 1097 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PRPF4BQ13523 1007 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 UBXN2BQ14CS0 331 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SAFBQ15424 915 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZSCAN23Q3MJ62 389 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 WDR44Q5JSH3 913 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZC3H14Q6PJT7 736 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TPRG1Q6ZUI0 275 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MTSS1LQ765P7 747 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MCPH1Q8NEM0 835 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GPT2Q8TD30 523 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TCEAL4Q96EI5 215 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 OSBPL6Q9BZF3 934 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 EPC1Q9H2F5 836 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GRPEL1Q9HAV7 217 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TUFT1Q9NNX1 390 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PARD6AQ9NPB6 346 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FBXO4Q9UKT5 387 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 POLIQ9UNA4 740 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ACACBO00763 2458 aa12.26□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CITO14578 2027 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ECI2O75521 394 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SEC24AO95486 1093 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ATP2B1P20020 1258 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 NAMPTP43490 491 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PUM1Q14671 1186 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MAPK6Q16659 721 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RSPO4Q2I0M5 234 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SLC8B1Q6J4K2 584 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ALKAL1Q6UXT8 129 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZBTB8OSQ8IWT0 167 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DAW1Q8N136 415 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 C2orf40Q9H1Z8 148 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PTPRHQ9HD43 1115 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DDX19AQ9NUU7 478 aaKnown RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PCDHGA2Q9Y5H1 932 aa12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MORC2Q9Y6X9 1032 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TULP1O00294 542 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ARNTLO00327 626 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SPTLC1O15269 473 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 KINO60870 393 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 XYLBO75191 536 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 B3GAT3O94766 335 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ABLIM3O94929 683 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 VNN2O95498 520 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 YEATS4O95619 227 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RPA1P27694 616 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MCM7P33993 719 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CSTF1Q05048 431 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ELAVL2Q12926 359 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MTAPQ13126 283 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MAPK7Q13164 816 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms