RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	PPP4R3A	Q6IN85	833 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	PKN3	Q6P5Z2	889 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	POTED	Q86YR6	584 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	TTC8	Q8TAM2	541 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	AIFM3	Q96NN9	605 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	AGXT2	Q9BYV1	514 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	PCDHGA5	Q9Y5G8	931 aa		18.63	■□□□□ 0.57
PKM-223	ENST00000569050	DSP	P15924	2871 aa	Known RBP	18.62	■□□□□ 0.57
PKM-223	ENST00000569050	DMXL2	Q8TDJ6	3036 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	TMEM8B	A6NDV4	472 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	TRAPPC3	O43617	180 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	LYPLA2	O95372	231 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	GCFC2	P16383	781 aa	Known RBP	18.62	■□□□□ 0.57
PKM-223	ENST00000569050	RARRES1	P49788	294 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	RING1	Q06587	406 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	FCHO2	Q0JRZ9	810 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	TWF1	Q12792	350 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	PON2	Q15165	354 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	EEF1DP3	Q658K8	133 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	IQCE	Q6IPM2	695 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	NEK8	Q86SG6	692 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	YAF2	Q8IY57	180 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	SHKBP1	Q8TBC3	707 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	GATA6	Q92908	595 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.62	■□□□□ 0.57
PKM-223	ENST00000569050	EDEM2	Q9BV94	578 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	ASAH2	Q9NR71	780 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	ANKEF1	Q9NU02	776 aa		18.62	■□□□□ 0.57
PKM-223	ENST00000569050	LAMA5	O15230	3695 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	CCNT1	O60563	726 aa	Known RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	USO1	O60763	962 aa	Known RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	PDIA3	P30101	505 aa	Known RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	GALNT17	Q6IS24	598 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	LRSAM1	Q6UWE0	723 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	MAEA	Q7L5Y9	396 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	RALGPS2	Q86X27	583 aa	Predicted RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	TRIM22	Q8IYM9	498 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	ELMOD1	Q8N336	334 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	FBXL16	Q8N461	479 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	E2F7	Q96AV8	911 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	ZNF512	Q96ME7	567 aa	Predicted RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	JAKMIP1	Q96N16	626 aa	Known RBP	18.61	■□□□□ 0.57
PKM-223	ENST00000569050	UROC1	Q96N76	676 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	HSD17B14	Q9BPX1	270 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	SLITRK6	Q9H5Y7	841 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	VPS45	Q9NRW7	570 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	GTSE1	Q9NYZ3	720 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	LHX6	Q9UPM6	363 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	NBEA	Q8NFP9	2946 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	SPAG17	Q6Q759	2223 aa		18.61	■□□□□ 0.57
PKM-223	ENST00000569050	PDCD11	Q14690	1871 aa	Known RBP	18.6	■□□□□ 0.57
PKM-223	ENST00000569050		A0A087WWV3	80 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	MARCH6	O60337	910 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	DEXI	O95424	95 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	CCDC192	P0DO97	292 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	SOX4	Q06945	474 aa	Predicted RBP	18.6	■□□□□ 0.57
PKM-223	ENST00000569050	SSRP1	Q08945	709 aa	Known RBP	18.6	■□□□□ 0.57
PKM-223	ENST00000569050	PRPF4B	Q13523	1007 aa	Known RBP	18.6	■□□□□ 0.57
PKM-223	ENST00000569050	TMEM132A	Q24JP5	1023 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	ZBTB8OS	Q8IWT0	167 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	SYNPO	Q8N3V7	929 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	LEMD2	Q8NC56	503 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	FAM200A	Q8TCP9	573 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	PIGO	Q8TEQ8	1089 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	ZFYVE19	Q96K21	471 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	CCDC43	Q96MW1	224 aa	Known RBP	18.6	■□□□□ 0.57
PKM-223	ENST00000569050	LRRC3B	Q96PB8	259 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	ADPGK	Q9BRR6	497 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	FBXL5	Q9UKA1	691 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	KCNJ14	Q9UNX9	436 aa		18.6	■□□□□ 0.57
PKM-223	ENST00000569050	CCDC163	A0A0D9SF12	145 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	CCDC194	A0A1B0GVG4	234 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	C4orf47	A7E2U8	309 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	MRPL58	Q14197	206 aa	Known RBP	18.59	■□□□□ 0.57
PKM-223	ENST00000569050	SH3PXD2A	Q5TCZ1	1133 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	TPGS2	Q68CL5	300 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	BLOC1S2	Q6QNY1	142 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	GPIHBP1	Q8IV16	184 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.59	■□□□□ 0.57
PKM-223	ENST00000569050	BSND	Q8WZ55	320 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	ZC3H10	Q96K80	434 aa	Known RBP	18.59	■□□□□ 0.57
PKM-223	ENST00000569050	CCDC113	Q9H0I3	377 aa		18.59	■□□□□ 0.57
PKM-223	ENST00000569050	SYN3	O14994	580 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	AKAP3	O75969	853 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	RPS6KB1	P23443	525 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	PLK5	Q496M5	336 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	STXBP5	Q5T5C0	1151 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	TMC8	Q8IU68	726 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	KCNB2	Q92953	911 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	SCNM1	Q9BWG6	230 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	LRRC3	Q9BY71	257 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	GPR88	Q9GZN0	384 aa		18.58	■□□□□ 0.56
PKM-223	ENST00000569050	AFF4	Q9UHB7	1163 aa	Known RBP	18.58	■□□□□ 0.56
PKM-223	ENST00000569050		A0A1W2PRU2	124 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050		H7C4K7	107 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050	ACKR2	O00590	384 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050	LIG1	P18858	919 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050	EVC	P57679	992 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050	TNK2	Q07912	1038 aa		18.57	■□□□□ 0.56
PKM-223	ENST00000569050	MAPK6	Q16659	721 aa		18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms