RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 APPL2Q8NEU8 664 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 CSGALNACT1Q8TDX6 532 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
FANCA-232ENST00000568983 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
FANCA-232ENST00000568983 RTKNQ9BST9 563 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 RAB34Q9BZG1 259 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
FANCA-232ENST00000568983 ZNF334Q9HCZ1 680 aaPredicted RBP13.2□□□□□ -0.3
FANCA-232ENST00000568983 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
FANCA-232ENST00000568983 DCDC2BA2VCK2 349 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 HIP1RO75146 1068 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 MICAL2O94851 1124 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 SEC24AO95486 1093 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 MCF2P10911 925 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 KCNA4P22459 653 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
FANCA-232ENST00000568983 VIPR2P41587 438 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 CCR2P41597 374 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 STRN3Q13033 797 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 VITQ6UXI7 678 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.19□□□□□ -0.3
FANCA-232ENST00000568983 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 LEMD2Q8NC56 503 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
FANCA-232ENST00000568983 NELL1Q92832 810 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
FANCA-232ENST00000568983 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
FANCA-232ENST00000568983 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 COL4A2P08572 1712 aa13.19□□□□□ -0.3
FANCA-232ENST00000568983 CITO14578 2027 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 GJA1P17302 382 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 CCNE1P24864 410 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■□□□□ 9.9
FANCA-232ENST00000568983 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
FANCA-232ENST00000568983 FZD5Q13467 585 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 LRRC32Q14392 662 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
FANCA-232ENST00000568983 TEAD2Q15562 447 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 ECM1Q16610 540 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 ZSWIM3Q96MP5 696 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
FANCA-232ENST00000568983 CEP72Q9P209 647 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 AFF4Q9UHB7 1163 aaKnown RBP13.18□□□□□ -0.3
FANCA-232ENST00000568983 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
FANCA-232ENST00000568983 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
FANCA-232ENST00000568983 GPR179Q6PRD1 2367 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 PDCD11Q14690 1871 aaKnown RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 E9PMD0 336 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 SLC16A4O15374 487 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 KCNE1P15382 129 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 CXCL12P48061 93 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 SATB1Q01826 763 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 PLD1Q13393 1074 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 NBR1Q14596 966 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 XKR4Q5GH76 650 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 POTEHQ6S545 545 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 USP37Q86T82 979 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 MAP4K3Q8IVH8 894 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 DDX12PQ92771 950 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 E2F7Q96AV8 911 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 SUSD3Q96L08 255 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 PGLYRP2Q96PD5 576 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 PARD6AQ9NPB6 346 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 ARHGAP28Q9P2N2 729 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 TUBGCP4Q9UGJ1 667 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 RBM19Q9Y4C8 960 aaKnown RBP13.17□□□□□ -0.3
FANCA-232ENST00000568983 YIPF1Q9Y548 306 aa13.17□□□□□ -0.3
FANCA-232ENST00000568983 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.16□□□□□ -0.3
FANCA-232ENST00000568983 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 SHISA7A6NL88 538 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 HEPACAM2A8MVW5 462 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
FANCA-232ENST00000568983 DPYSL4O14531 572 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 RETP07949 1114 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
FANCA-232ENST00000568983 EPHB3P54753 998 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms