RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 NFXL1Q6ZNB6 911 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 TMC3Q7Z5M5 1100 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 RBM23Q86U06 439 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 ADGRF4Q8IZF3 695 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 SPPL3Q8TCT6 385 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 NETO1Q8TDF5 533 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 P2RX5Q93086 422 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PPP2R3CQ969Q6 453 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 ZNF689Q96CS4 500 aaPredicted RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 TTC14Q96N46 770 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PHF7Q9BWX1 381 aaPredicted RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 ASPNQ9BXN1 380 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PRDM14Q9GZV8 571 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 MKRN2Q9H000 416 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 CHMP4BQ9H444 224 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 BCAS3Q9H6U6 928 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 MLXIPQ9HAP2 919 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 SEMA3GQ9NS98 782 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 MRPL11Q9Y3B7 192 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 ZFHX4Q86UP3 3567 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PRR23AA6NEV1 266 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 H3BS24 57 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 NOP56O00567 594 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 CBFA2T2O43439 604 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 DGKIO75912 1065 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 FGAP02671 866 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 TGFB3P10600 412 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 GHRP10912 638 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 GNAT1P11488 350 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 SRFP11831 508 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 ICAM3P32942 547 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 HSD17B4P51659 736 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 HAND2P61296 217 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 ADAM17P78536 824 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 SLC7A5Q01650 507 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 AUHQ13825 339 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 RAB33AQ14088 237 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 LPIN1Q14693 890 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 PGM5Q15124 567 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 ALX1Q15699 326 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 IFI16Q16666 785 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 KIAA1211LQ6NV74 962 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 VHLLQ6RSH7 139 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 VSIG10LQ86VR7 867 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 WFDC3Q8IUB2 231 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 OTUD7AQ8TE49 926 aaPredicted RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 POF1BQ8WVV4 589 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 RIPOR3Q96MK2 946 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 PDCD2LQ9BRP1 358 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 DCTPP1Q9H773 170 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 TLE6Q9H808 572 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 VAT1LQ9HCJ6 419 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 SUSD2Q9UGT4 822 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 ZNF451Q9Y4E5 1061 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 MRPL42Q9Y6G3 142 aaKnown RBP6.49□□□□□ -1.37
CDH13-211ENST00000568770 CACNA1BQ00975 2339 aa6.49□□□□□ -1.37
CDH13-211ENST00000568770 EPG5Q9HCE0 2579 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 PER2O15055 1255 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 DHX16O60231 1041 aaKnown RBP6.48□□□□□ -1.37
CDH13-211ENST00000568770 GJB6O95452 261 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 ATF7P17544 494 aaPredicted RBP6.48□□□□□ -1.37
CDH13-211ENST00000568770 SPINK2P20155 84 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 HOXA13P31271 388 aaPredicted RBP6.48□□□□□ -1.37
CDH13-211ENST00000568770 NBL1P41271 181 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 ID4P47928 161 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 RNF4P78317 190 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 PAN2Q504Q3 1202 aaKnown RBP6.48□□□□□ -1.37
CDH13-211ENST00000568770 ASPRV1Q53RT3 343 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 MFSD6Q6ZSS7 791 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 STOX1Q6ZVD7 989 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 VN1R2Q8NFZ6 395 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 IL31RAQ8NI17 732 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 LMBR1Q8WVP7 490 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 SUSD6Q92537 303 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 UBE2FQ969M7 185 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 JMJD4Q9H9V9 463 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 TELO2Q9Y4R8 837 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 EP300Q09472 2414 aaPredicted RBP6.48□□□□□ -1.37
CDH13-211ENST00000568770 C2orf16Q68DN1 1984 aa6.48□□□□□ -1.37
CDH13-211ENST00000568770 DENND4AQ7Z401 1863 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 FANCMQ8IYD8 2048 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 WDR81Q562E7 1941 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 DDAH1O94760 285 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 PARP1P09874 1014 aaKnown RBP6.47□□□□□ -1.37
CDH13-211ENST00000568770 PCP11498 1178 aaKnown RBP6.47□□□□□ -1.37
CDH13-211ENST00000568770 SP100P23497 879 aaPredicted RBP6.47□□□□□ -1.37
CDH13-211ENST00000568770 CCND2P30279 289 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 GHRHRQ02643 423 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 MGAT3Q09327 533 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 DDR2Q16832 855 aa6.47□□□□□ -1.37
CDH13-211ENST00000568770 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms