RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 STAMQ92783 540 aa31.94■■■□□ 2.7
RAB40C-211ENST00000568586 TRIM9Q9C026 710 aa31.94■■■□□ 2.7
RAB40C-211ENST00000568586 TBC1D7Q9P0N9 293 aa31.94■■■□□ 2.7
RAB40C-211ENST00000568586 LIMD1Q9UGP4 676 aa31.94■■■□□ 2.7
RAB40C-211ENST00000568586 N4BP1O75113 896 aaKnown RBP31.93■■■□□ 2.7
RAB40C-211ENST00000568586 ABLIM3O94929 683 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 ACOT2P49753 483 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 DNM1Q05193 864 aaKnown RBP31.93■■■□□ 2.7
RAB40C-211ENST00000568586 FOXD4L6Q3SYB3 417 aaPredicted RBP31.93■■■□□ 2.7
RAB40C-211ENST00000568586 LIN9Q5TKA1 542 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 CRELD2Q6UXH1 353 aaPredicted RBP31.93■■■□□ 2.7
RAB40C-211ENST00000568586 FOXD4L3Q6VB84 417 aaPredicted RBP31.93■■■□□ 2.7
RAB40C-211ENST00000568586 CCDC65Q8IXS2 484 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 UBALD2Q8IYN6 164 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 RAPGEFL1Q9UHV5 662 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 PCDHB8Q9UN66 801 aa31.93■■■□□ 2.7
RAB40C-211ENST00000568586 TMEM221A6NGB7 291 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 H7C4K7 107 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 M0R296 226 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 GCNT3O95395 438 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 C8AP07357 584 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 PAX3P23760 479 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 AMPD3Q01432 767 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 RESP18Q5W5W9 173 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 JADE1Q6IE81 842 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 APPL2Q8NEU8 664 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 ZNF461Q8TAF7 563 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 ASIC4Q96FT7 647 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 FGFBP2Q9BYJ0 223 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 MAGEF1Q9HAY2 307 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 ZDHHC9Q9Y397 364 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 C2CD2Q9Y426 696 aa31.92■■■□□ 2.7
RAB40C-211ENST00000568586 MCM4P33991 863 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 TMEM130Q8N3G9 435 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 POMGNT1Q8WZA1 660 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 DHX58Q96C10 678 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 PIDD1Q9HB75 910 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 EPS15L1Q9UBC2 864 aa31.91■■■□□ 2.7
RAB40C-211ENST00000568586 OAZ2O95190 189 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 ME1P48163 572 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 ROR1Q01973 937 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 MTMR3Q13615 1198 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 PPM1LQ5SGD2 360 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 BEST2Q8NFU1 509 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 C7orf25Q9BPX7 421 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.9■■■□□ 2.74e-8■■■■□ 20
RAB40C-211ENST00000568586 FBXL5Q9UKA1 691 aa31.9■■■□□ 2.7
RAB40C-211ENST00000568586 ANO9A1A5B4 782 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 NFICP08651 508 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 GARTP22102 1010 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 SLC7A14Q8TBB6 771 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 MFSD14AQ96MC6 490 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 TMEM206Q9H813 350 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 HCN4Q9Y3Q4 1203 aa31.89■■■□□ 2.7
RAB40C-211ENST00000568586 ZNF318Q5VUA4 2279 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 WDR27A2RRH5 827 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 PIRO00625 290 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 POLR2DO15514 142 aaKnown RBP31.88■■■□□ 2.69
RAB40C-211ENST00000568586 ASGR2P07307 311 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 GUCY2FP51841 1108 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 TMEM132DQ14C87 1099 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 TPGS2Q68CL5 300 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 NT5DC4Q86YG4 428 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 FAM212AQ96EL1 285 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 OXCT2Q9BYC2 517 aaPredicted RBP31.88■■■□□ 2.69
RAB40C-211ENST00000568586 FAM13BQ9NYF5 915 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 MAFFQ9ULX9 164 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 ZDBF2Q9HCK1 2354 aa31.88■■■□□ 2.69
RAB40C-211ENST00000568586 ARHGEF37A1IGU5 675 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 XYLBO75191 536 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 ATF2P15336 505 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 LILRA4P59901 499 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 EHHADHQ08426 723 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 C9orf57Q5W0N0 161 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 ZNF280DQ6N043 979 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 TCEAL8Q8IYN2 117 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 MYADMQ96S97 322 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 IGSF9Q9P2J2 1179 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 DOCK8Q8NF50 2099 aa31.87■■■□□ 2.69
RAB40C-211ENST00000568586 ANK1P16157 1881 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 MUC6Q6W4X9 2439 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 PPEF2O14830 753 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 IL18RAPO95256 599 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 LDHAP00338 332 aaKnown RBP31.86■■■□□ 2.69
RAB40C-211ENST00000568586 CTXN3Q4LDR2 81 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 PYM1Q9BRP8 204 aaKnown RBP31.86■■■□□ 2.69
RAB40C-211ENST00000568586 KCNK12Q9HB15 430 aa31.86■■■□□ 2.69
RAB40C-211ENST00000568586 ZFP37Q9Y6Q3 630 aaPredicted RBP31.86■■■□□ 2.69
RAB40C-211ENST00000568586 PRPF6O94906 941 aaKnown RBP31.85■■■□□ 2.69
RAB40C-211ENST00000568586 TYMPP19971 482 aa31.85■■■□□ 2.69
RAB40C-211ENST00000568586 STXBP4Q6ZWJ1 553 aa31.85■■■□□ 2.69
RAB40C-211ENST00000568586 EPM2AIP1Q7L775 607 aaPredicted RBP31.85■■■□□ 2.69
RAB40C-211ENST00000568586 GRASPQ7Z6J2 395 aaPredicted RBP31.85■■■□□ 2.69
RAB40C-211ENST00000568586 SYCP3Q8IZU3 236 aa31.85■■■□□ 2.69
RAB40C-211ENST00000568586 NXPE3Q969Y0 559 aa31.85■■■□□ 2.69
RAB40C-211ENST00000568586 EIF3DO15371 548 aaKnown RBP eCLIP31.84■■■□□ 2.69
RAB40C-211ENST00000568586 CCL16O15467 120 aa31.84■■■□□ 2.69
RAB40C-211ENST00000568586 LAMP2P13473 410 aa31.84■■■□□ 2.69
RAB40C-211ENST00000568586 GBP2P32456 591 aaPredicted RBP31.84■■■□□ 2.69
RAB40C-211ENST00000568586 HOXD13P35453 343 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms