RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 GALNT17Q6IS24 598 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 BLOC1S2Q6QNY1 142 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 NEK8Q86SG6 692 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 DAGLBQ8NCG7 672 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 TCEAL3Q969E4 200 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 RSPRY1Q96DX4 576 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.44
CLK3-223ENST00000568488 FZD8Q9H461 694 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 ASAH2Q9NR71 780 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 VPS45Q9NRW7 570 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 CEP72Q9P209 647 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 ARID2Q68CP9 1835 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 MYBPHLA2RUH7 354 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 USO1O60763 962 aaKnown RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 TOP3BO95985 862 aaKnown RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 GCFC2P16383 781 aaKnown RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 CTHP32929 405 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 NPY5RQ15761 445 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 RALGPS2Q86X27 583 aaPredicted RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 C3orf58Q8NDZ4 430 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 UROC1Q96N76 676 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 AIFM3Q96NN9 605 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 PPP1R10Q96QC0 940 aaKnown RBP17.82■□□□□ 0.44
CLK3-223ENST00000568488 ADAM33Q9BZ11 813 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 LHX6Q9UPM6 363 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 PCDHGA5Q9Y5G8 931 aa17.82■□□□□ 0.44
CLK3-223ENST00000568488 C4orf47A7E2U8 309 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 H7C4K7 107 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 DEXIO95424 95 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 RARRES1P49788 294 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 TPGS2Q68CL5 300 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 ZFYVE19Q96K21 471 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 EDEM2Q9BV94 578 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 GTSE1Q9NYZ3 720 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 FBXL5Q9UKA1 691 aa17.81■□□□□ 0.44
CLK3-223ENST00000568488 TMEM8BA6NDV4 472 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 RING1Q06587 406 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 CCINQ13939 588 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 MAPK6Q16659 721 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 CTXN3Q4LDR2 81 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 DAB2IPQ5VWQ8 1189 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 EEF1DP3Q658K8 133 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 SLFN12Q8IYM2 578 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 SYNPOQ8N3V7 929 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 LEMD2Q8NC56 503 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 SHKBP1Q8TBC3 707 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
CLK3-223ENST00000568488 PDCD11Q14690 1871 aaKnown RBP17.8■□□□□ 0.44
CLK3-223ENST00000568488 A0A1W2PRU2 124 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 DPYSL4O14531 572 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 CPLX1O14810 134 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 LYPLA2O95372 231 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 FCHO2Q0JRZ9 810 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 SH3PXD2AQ5TCZ1 1133 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 CDCA2Q69YH5 1023 aaPredicted RBP17.79■□□□□ 0.44
CLK3-223ENST00000568488 PKN3Q6P5Z2 889 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 PIK3AP1Q6ZUJ8 805 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 HAUS6Q7Z4H7 955 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 NAP1L4Q99733 375 aaKnown RBP17.79■□□□□ 0.44
CLK3-223ENST00000568488 HSD17B14Q9BPX1 270 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 C2orf40Q9H1Z8 148 aa17.79■□□□□ 0.44
CLK3-223ENST00000568488 LAMA1P25391 3075 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 IGF2RP11717 2491 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 ACKR2O00590 384 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 ATP2B1P20020 1258 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 EPHA5P54756 1037 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 CREB5Q02930 508 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 DCAF4L1Q3SXM0 396 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 ARID3BQ8IVW6 561 aaPredicted RBP17.78■□□□□ 0.44
CLK3-223ENST00000568488 ZCCHC14Q8WYQ9 949 aaKnown RBP17.78■□□□□ 0.44
CLK3-223ENST00000568488 ZC3H10Q96K80 434 aaKnown RBP17.78■□□□□ 0.44
CLK3-223ENST00000568488 SCNM1Q9BWG6 230 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 TMEM121BQ9BXQ6 578 aaPredicted RBP17.78■□□□□ 0.44
CLK3-223ENST00000568488 AFF4Q9UHB7 1163 aaKnown RBP17.78■□□□□ 0.44
CLK3-223ENST00000568488 PCDHA12Q9UN75 941 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 NUB1Q9Y5A7 615 aa17.78■□□□□ 0.44
CLK3-223ENST00000568488 CCDC163A0A0D9SF12 145 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 SMIM28A0A1B0GU29 152 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 PODXLO00592 558 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 SYN3O14994 580 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 CAVIN2O95810 425 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 EDN1P05305 212 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 CPB1P15086 417 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 SOX4Q06945 474 aaPredicted RBP17.77■□□□□ 0.44
CLK3-223ENST00000568488 PLK5Q496M5 336 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 STXBP5Q5T5C0 1151 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 FBXL16Q8N461 479 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 DEPTORQ8TB45 409 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 LRRC3BQ96PB8 259 aa17.77■□□□□ 0.44
CLK3-223ENST00000568488 AGXT2Q9BYV1 514 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms