RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PRKCIP41743 596 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ARL4CP56559 192 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PPATQ06203 517 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 HIC1Q14526 733 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 LCA5Q86VQ0 697 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ARHGEF19Q8IW93 802 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ACCSQ96QU6 501 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 CBWD1Q9BRT8 395 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
PALB2-206ENST00000568219 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 GALNT8Q9NY28 637 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
PALB2-206ENST00000568219 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 MEI4A8MW99 385 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PEX11AO75192 247 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 RASA2Q15283 850 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ACBD5Q5T8D3 534 aaPredicted RBP11.51□□□□□ -0.57
PALB2-206ENST00000568219 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PPP4R1Q8TF05 950 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 OLFM3Q96PB7 478 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 WHRNQ9P202 907 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 TJP3O95049 919 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 RPA1P27694 616 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 DLG4P78352 724 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PDE1BQ01064 536 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 SEPT6Q14141 434 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 EMC10Q5UCC4 262 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 OTOAQ7RTW8 1153 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 RHOT1Q8IXI2 618 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 GALNT15Q8N3T1 639 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.51□□□□□ -0.57
PALB2-206ENST00000568219 ART4Q93070 314 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
PALB2-206ENST00000568219 LRGUKQ96M69 825 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 TMEM121Q9BTD3 319 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 ARL8BQ9NVJ2 186 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 IQANK1A0A1B0GTG1 560 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 MX2P20592 715 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 ANXA13P27216 316 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 GRIK5Q16478 980 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 SLC35G1Q2M3R5 365 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 TMEM119Q4V9L6 283 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 SCUBE1Q8IWY4 988 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 RIBC1Q8N443 379 aaPredicted RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 ADAM7Q9H2U9 754 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 Q9H521 79 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 FCHO1O14526 889 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 SLC16A3O15427 465 aaKnown RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 EYA4O95677 639 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 DRG2P55039 364 aaKnown RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 SMTNL2Q2TAL5 461 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 RSPH3Q86UC2 560 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 TTC25Q96NG3 672 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 IRF6O14896 467 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 PDE5AO76074 875 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 MAP3K6O95382 1288 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 TFDP1Q14186 410 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
PALB2-206ENST00000568219 RFWD2Q8NHY2 731 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 EXOC7Q9UPT5 735 aa11.5□□□□□ -0.57
PALB2-206ENST00000568219 FAM237BA0A1B0GVD1 139 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 KLHL33A6NCF5 533 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 ADCY3O60266 1144 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 KRT19P08727 400 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 TCN1P20061 433 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 ATP13A4Q4VNC1 1196 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 FAM213AQ9BRX8 229 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 LRMDAQ9H2I8 198 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 KIAA1586Q9HCI6 787 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 MRPL47Q9HD33 250 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 SAE1Q9UBE0 346 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 APPL1Q9UKG1 709 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 LZTS1Q9Y250 596 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 R3HDM2Q9Y2K5 976 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 CASQ2O14958 399 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 WDR4P57081 412 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 ORC2Q13416 577 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 CNGA3Q16281 694 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 DNAJC24Q6P3W2 148 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 C4orf50Q6ZRC1 276 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 NOP9Q86U38 636 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms