RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 COL4A3BPQ9Y5P4 624 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 LOXHD1Q8IVV2 1947 aa8.52□□□□□ -1.04
SMG1-214ENST00000568038 SMIM35A0A1B0GVV1 85 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 LRRIQ4A6NIV6 560 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 DCDC2CA8MYV0 355 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 KLRC4O43908 158 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PQBP1O60828 265 aaKnown RBP8.52□□□□□ -1.05
SMG1-214ENST00000568038 SRGAP2CP0DJJ0 459 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 GLRA2P23416 452 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
SMG1-214ENST00000568038 ARL2P36404 184 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 GRIA4P48058 902 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 CD97P48960 835 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PEX3P56589 373 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 RTP1P59025 263 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PCDH1Q08174 1060 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 TMEM62Q0P6H9 643 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 LAMTOR4Q0VGL1 99 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 ORC1Q13415 861 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 LRRC26Q2I0M4 334 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 ODR4Q5SWX8 454 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 TAF2Q6P1X5 1199 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 CNNM4Q6P4Q7 775 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 UNC13DQ70J99 1090 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 SERINC5Q86VE9 423 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 KSR1Q8IVT5 923 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 LINC01465Q8N7H1 131 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.05
SMG1-214ENST00000568038 HPS3Q969F9 1004 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 CCDC47Q96A33 483 aaKnown RBP8.52□□□□□ -1.05
SMG1-214ENST00000568038 IFT74Q96LB3 600 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 SCLT1Q96NL6 688 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 TMPRSS13Q9BYE2 586 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 SEZ6LQ9BYH1 1024 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 PARVGQ9HBI0 331 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 LARSQ9P2J5 1176 aaKnown RBP8.52□□□□□ -1.05
SMG1-214ENST00000568038 GINS2Q9Y248 185 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 ATP11BQ9Y2G3 1177 aa8.52□□□□□ -1.05
SMG1-214ENST00000568038 RBAK-RBAKDNI3L0D1 243 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 SLC16A4O15374 487 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 TLR3O15455 904 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 ASAP2O43150 1006 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 CD4P01730 458 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 CTSHP09668 335 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 PLS3P13797 630 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 GAP43P17677 238 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 NMT1P30419 496 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 THPOP40225 353 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 NPTX2P47972 431 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 SARSP49591 514 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 ZNF131P52739 623 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 NLRP11P59045 1033 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 TLE2Q04725 743 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 DMP1Q13316 513 aaPredicted RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 CAPSQ13938 189 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 MXD4Q14582 209 aaPredicted RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 KIZQ2M2Z5 673 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 EXOSC6Q5RKV6 272 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 RNF149Q8NC42 400 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 DEPTORQ8TB45 409 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 GSDMAQ96QA5 445 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 KIFC3Q9BVG8 833 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 MRPL44Q9H9J2 332 aaKnown RBP8.51□□□□□ -1.05
SMG1-214ENST00000568038 SLC39A2Q9NP94 309 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 KMT5AQ9NQR1 393 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 MAN1B1Q9UKM7 699 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 MROH7Q68CQ1 1323 aa8.51□□□□□ -1.05
SMG1-214ENST00000568038 A0A087WZ62 844 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 K7ENM7 598 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 M0QZ92 97 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 CSDE1O75534 798 aaKnown RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 RHOBTB3O94955 611 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 GRIK1P39086 918 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 NAMPTP43490 491 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 GPC3P51654 580 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 MRPS6P82932 125 aaKnown RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 STK4Q13043 487 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 TFDP1Q14186 410 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 KCNB1Q14721 858 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 SNX17Q15036 470 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 PPP2R5AQ15172 486 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 ZNF423Q2M1K9 1284 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 TRIM71Q2Q1W2 868 aaKnown RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 ZC2HC1CQ53FD0 456 aaPredicted RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 FAM26FQ5R3K3 315 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 HAUS6Q7Z4H7 955 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms