RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 BHMT2Q9H2M3 363 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
FANCA-227ENST00000567883 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
FANCA-227ENST00000567883 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
FANCA-227ENST00000567883 LRP3O75074 770 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 MOSPD3O75425 235 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 MCF2P10911 925 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 PROZP22891 400 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 GDI1P31150 447 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 NPTX2P47972 431 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
FANCA-227ENST00000567883 CCR3P51677 355 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 GRM2Q14416 872 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 PDIA5Q14554 519 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 ZNF174Q15697 407 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 ECM1Q16610 540 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 ZNF568Q3ZCX4 644 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 LAIR1Q6GTX8 287 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 VITQ6UXI7 678 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 MFSD6LQ8IWD5 586 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 FAM3CQ92520 227 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 E2F7Q96AV8 911 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 MSANTD3Q96H12 275 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 SUSD3Q96L08 255 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
FANCA-227ENST00000567883 GPR88Q9GZN0 384 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 FOXP1Q9H334 677 aaPredicted RBP12.12□□□□□ -0.47
FANCA-227ENST00000567883 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 ARHGAP28Q9P2N2 729 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 AFF4Q9UHB7 1163 aaKnown RBP12.12□□□□□ -0.47
FANCA-227ENST00000567883 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
FANCA-227ENST00000567883 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
FANCA-227ENST00000567883 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
FANCA-227ENST00000567883 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 CNOT1A5YKK6 2376 aaKnown RBP12.11□□□□□ -0.47
FANCA-227ENST00000567883 CCDC169A6NNP5 214 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
FANCA-227ENST00000567883 RETP07949 1114 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
FANCA-227ENST00000567883 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 FOSBP53539 338 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 ARPP19P56211 112 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 OSTNP61366 133 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 CTXN3Q4LDR2 81 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 ZNF280DQ6N043 979 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 TAS1R3Q7RTX0 852 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 APPL2Q8NEU8 664 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
FANCA-227ENST00000567883 OXCT2Q9BYC2 517 aaPredicted RBP12.11□□□□□ -0.47
FANCA-227ENST00000567883 C17orf75Q9HAS0 396 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 CEP72Q9P209 647 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 PIAS3Q9Y6X2 628 aa12.11□□□□□ -0.47
FANCA-227ENST00000567883 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 ARNTLO00327 626 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 ABLIM1O14639 778 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 ZNF263O14978 683 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 PAPSS2O95340 614 aaPredicted RBP12.1□□□□□ -0.47
FANCA-227ENST00000567883 CHRNB1P11230 501 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 CNR2P34972 360 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 CXCL12P48061 93 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 PEX3P56589 373 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 TWF1Q12792 350 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
FANCA-227ENST00000567883 TTC38Q5R3I4 469 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 MPZL3Q6UWV2 235 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 DAW1Q8N136 415 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 IGSF22Q8N9C0 903 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 DDX12PQ92771 950 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 C18orf25Q96B23 403 aaPredicted RBP12.1□□□□□ -0.47
FANCA-227ENST00000567883 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 TBC1D32Q96NH3 1257 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 TARS2Q9BW92 718 aaKnown RBP12.1□□□□□ -0.47
FANCA-227ENST00000567883 ASAH2Q9NR71 780 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 DDX19AQ9NUU7 478 aaKnown RBP12.1□□□□□ -0.47
FANCA-227ENST00000567883 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 MYH11P35749 1972 aa12.1□□□□□ -0.47
FANCA-227ENST00000567883 DCDC2BA2VCK2 349 aa12.09□□□□□ -0.47
FANCA-227ENST00000567883 CHADO15335 359 aa12.09□□□□□ -0.47
FANCA-227ENST00000567883 MEFVO15553 781 aaPredicted RBP12.09□□□□□ -0.47
FANCA-227ENST00000567883 HIP1RO75146 1068 aa12.09□□□□□ -0.47
FANCA-227ENST00000567883 MARCKSP29966 332 aaPredicted RBP12.09□□□□□ -0.47
FANCA-227ENST00000567883 VIPR2P41587 438 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms