RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MYCT1Q8N699 235 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ZSWIM2Q8NEG5 633 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ATRIPQ8WXE1 791 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CTAGE1Q96RT6 745 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 MAF1Q9H063 256 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 MIR1-1HGQ9H1L0 117 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PARVGQ9HBI0 331 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 XPNPEP1Q9NQW7 623 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PDGFCQ9NRA1 345 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 OLFML3Q9NRN5 406 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SLC9A2Q9UBY0 812 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 TRAF3IP3Q9Y228 551 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SIK3Q9Y2K2 1263 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PCDHA10Q9Y5I2 948 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CENPFP49454 3210 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ADGRA3Q8IWK6 1321 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 IGKV6D-21A0A0A0MT36 114 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TTC26A0AVF1 554 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 AKR1B15C9JRZ8 316 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 K7ENM7 598 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 IGF2BP3O00425 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MAFGO15525 162 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 DYRK3O43781 588 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RNGTTO60942 597 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 OFD1O75665 1012 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 STAM2O75886 525 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 GGPS1O95749 300 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 IGHA1P01876 353 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 NFICP08651 508 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 CETPP11597 493 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 VAMP1P23763 118 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MAP4P27816 1152 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SFNP31947 248 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 GTF2A2P52657 109 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RPS26P62854 115 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 FKBP1BP68106 108 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 APBA1Q02410 837 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SYCP1Q15431 976 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MAN2A1Q16706 1144 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 KNOP1Q1ED39 458 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF792Q3KQV3 632 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 GNPTABQ3T906 1256 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 FILIP1LQ4L180 1135 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 VWA3BQ502W6 1294 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 ZC3H12AQ5D1E8 599 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 WIPI1Q5MNZ9 446 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MAMDC4Q6UXC1 1216 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RAD9BQ6WBX8 426 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 BEND4Q6ZU67 534 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TOGARAM2Q6ZUX3 1019 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TRIM59Q8IWR1 403 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SMAP1Q8IYB5 467 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 CCAR2Q8N163 923 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 C2orf69Q8N8R5 385 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SHCBP1Q8NEM2 672 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RDM1Q8NG50 284 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 FBXO27Q8NI29 283 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MORC4Q8TE76 937 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SMCR8Q8TEV9 937 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 PLPPR2Q96GM1 343 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RHOVQ96L33 236 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TSG101Q99816 390 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 RSRP1Q9BUV0 290 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 KIFC3Q9BVG8 833 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 GTPBP4Q9BZE4 634 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 KATNBL1Q9H079 304 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MROH8Q9H579 483 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 PDLIM7Q9NR12 457 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 ANKEF1Q9NU02 776 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TYW1Q9NV66 732 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 TRMT1Q9NXH9 659 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 MORF4L1Q9UBU8 362 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 DDX41Q9UJV9 622 aaKnown RBP6.28□□□□□ -1.4
SF3B3-210ENST00000567654 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 SLC45A1Q9Y2W3 748 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 COL4A3BPQ9Y5P4 624 aa6.28□□□□□ -1.4
SF3B3-210ENST00000567654 UBE4BO95155 1302 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 PASKQ96RG2 1323 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 A0A1W2PQC6 194 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
SF3B3-210ENST00000567654 PDXKO00764 312 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 FANCGO15287 622 aa6.27□□□□□ -1.41
SF3B3-210ENST00000567654 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
SF3B3-210ENST00000567654 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
SF3B3-210ENST00000567654 DYNC1LI2O43237 492 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms