RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 B4GALNT4Q76KP1 1039 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 CAPNS2Q96L46 248 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.88■■□□□ 1.57
LINC00543-201ENST00000567234 UVRAGQ9P2Y5 699 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 PGRMC1O00264 195 aaKnown RBP24.87■■□□□ 1.57
LINC00543-201ENST00000567234 CEP104O60308 925 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 TNFRSF8P28908 595 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 TNNC1P63316 161 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 NOP14P78316 857 aaKnown RBP24.87■■□□□ 1.57
LINC00543-201ENST00000567234 ACVR2BQ13705 512 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 DUOXA2Q1HG44 320 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 FAM84AQ96KN4 292 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 RPS6KC1Q96S38 1066 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 APOBEC3GQ9HC16 384 aaKnown RBP24.87■■□□□ 1.57
LINC00543-201ENST00000567234 STIM2Q9P246 746 aa24.87■■□□□ 1.57
LINC00543-201ENST00000567234 MIF4GDA9UHW6 222 aaKnown RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 H3BRB1 525 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 ZEB2O60315 1214 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 CLUL1Q15846 466 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 ZNF568Q3ZCX4 644 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 SEZ6Q53EL9 994 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 CARD9Q9H257 536 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 TUT1Q9H6E5 874 aaKnown RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 IFT122Q9HBG6 1241 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 SRRM3A6NNA2 597 aaPredicted RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 DDX3YO15523 660 aaKnown RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 OPA1O60313 960 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 B4GALT4O60513 344 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 ASS1P00966 412 aaKnown RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 GJB1P08034 283 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 SMPD1P17405 629 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 IGBP1P78318 339 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 C17orf99Q6UX52 265 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 TRIM72Q6ZMU5 477 aa24.86■■□□□ 1.57
LINC00543-201ENST00000567234 DMGDHQ9UI17 866 aaKnown RBP24.86■■□□□ 1.57
LINC00543-201ENST00000567234 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.85■■□□□ 1.57
LINC00543-201ENST00000567234 CCDC188H7C350 402 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 UNGP13051 313 aaPredicted RBP24.85■■□□□ 1.57
LINC00543-201ENST00000567234 SPOPLQ6IQ16 392 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 PPP1R2P3Q6NXS1 205 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 CNPY4Q8N129 248 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 MICALL1Q8N3F8 863 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 ELMO3Q96BJ8 720 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 TRIM11Q96F44 468 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 ALG6Q9Y672 507 aa24.85■■□□□ 1.57
LINC00543-201ENST00000567234 IL18RAPO95256 599 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 MMP3P08254 477 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 SKOR1P84550 965 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 NOGQ13253 232 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 DGKDQ16760 1214 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 SGSM1Q2NKQ1 1148 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 MTHFD1LQ6UB35 978 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 NPLOC4Q8TAT6 608 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 MINDY3Q9H8M7 445 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 NUB1Q9Y5A7 615 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 GOLGA6CA6NDK9 693 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 HOXC6P09630 235 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 ZNF286BP0CG31 522 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 GOLGA6DP0CG33 693 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 MYBL1P10243 752 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 IRAK1P51617 712 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 TNFAIP2Q03169 654 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 TMEM132AQ24JP5 1023 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 YTHDF3Q7Z739 585 aaKnown RBP24.84■■□□□ 1.57
LINC00543-201ENST00000567234 OR6J1Q8NGC5 347 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 HDAC7Q8WUI4 952 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 ZNF653Q96CK0 615 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 CDT1Q9H211 546 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 ZFYVE28Q9HCC9 887 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 AVENQ9NQS1 362 aaPredicted RBP24.84■■□□□ 1.57
LINC00543-201ENST00000567234 GOLGA6AQ9NYA3 693 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 GGA2Q9UJY4 613 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 NOC2LQ9Y3T9 749 aaKnown RBP24.84■■□□□ 1.57
LINC00543-201ENST00000567234 PCDHB4Q9Y5E5 795 aa24.84■■□□□ 1.57
LINC00543-201ENST00000567234 EIF3HO15372 352 aaKnown RBP eCLIP24.83■■□□□ 1.57
LINC00543-201ENST00000567234 CYP1A1P04798 512 aaPredicted RBP24.83■■□□□ 1.57
LINC00543-201ENST00000567234 KYAT1Q16773 422 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 MORN1Q5T089 497 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 ALS2CLQ60I27 953 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 UBR7Q8N806 425 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 NAP1L3Q99457 506 aaPredicted RBP24.83■■□□□ 1.57
LINC00543-201ENST00000567234 SH3GL2Q99962 352 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 FAM169AQ9Y6X4 670 aa24.83■■□□□ 1.57
LINC00543-201ENST00000567234 MGAMO43451 1857 aa24.83■■□□□ 1.56
LINC00543-201ENST00000567234 B4GALT5O43286 388 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 MCF2P10911 925 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 AMHR2Q16671 573 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 EEF1DP3Q658K8 133 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 IFT20Q8IY31 132 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 ZNF564Q8TBZ8 553 aaPredicted RBP24.82■■□□□ 1.56
LINC00543-201ENST00000567234 ZBTB10Q96DT7 871 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 NUP85Q9BW27 656 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 MTMR12Q9C0I1 747 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 AKT3Q9Y243 479 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 A0A087WZ62 844 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 ZMYND10O75800 440 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 CST3P01034 146 aaPredicted RBP24.82■■□□□ 1.56
LINC00543-201ENST00000567234 IQCF3P0C7M6 154 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 CENPCQ03188 943 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 THNSL1Q8IYQ7 743 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms