RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 UPP1Q16831 310 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 TMEM132AQ24JP5 1023 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 TPGS2Q68CL5 300 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 TXNDC11Q6PKC3 985 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 NEK8Q86SG6 692 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 ZBTB8OSQ8IWT0 167 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 NUP205Q92621 2012 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 PPP1R10Q96QC0 940 aaKnown RBP18.53■□□□□ 0.56
CDH3-205ENST00000566808 EDEM2Q9BV94 578 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 GPR88Q9GZN0 384 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 FZD8Q9H461 694 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 I3L4J1 428 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 MARCH6O60337 910 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 SEC24AO95486 1093 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 CCDC192P0DO97 292 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
CDH3-205ENST00000566808 RARRES1P49788 294 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 GLRA4Q5JXX5 417 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 CD300LGQ6UXG3 332 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 NAP1L4Q99733 375 aaKnown RBP18.52■□□□□ 0.56
CDH3-205ENST00000566808 AGXT2Q9BYV1 514 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 SMOC1Q9H4F8 434 aa18.52■□□□□ 0.56
CDH3-205ENST00000566808 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
CDH3-205ENST00000566808 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
CDH3-205ENST00000566808 LOC400499M0QZD8 3231 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 CITO14578 2027 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 SRRM3A6NNA2 597 aaPredicted RBP18.51■□□□□ 0.55
CDH3-205ENST00000566808 SYN3O14994 580 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 SLITRK3O94933 977 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 DEXIO95424 95 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 MYL4P12829 197 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 PRPF4BQ13523 1007 aaKnown RBP18.51■□□□□ 0.55
CDH3-205ENST00000566808 DCAF4L1Q3SXM0 396 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 NOSTRINQ8IVI9 506 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 HS6ST3Q8IZP7 471 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 GATA6Q92908 595 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 RSPRY1Q96DX4 576 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 ZC3H10Q96K80 434 aaKnown RBP18.51■□□□□ 0.55
CDH3-205ENST00000566808 ZNF512Q96ME7 567 aaPredicted RBP18.51■□□□□ 0.55
CDH3-205ENST00000566808 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 MAFFQ9ULX9 164 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 GDAQ9Y2T3 454 aa18.51■□□□□ 0.55
CDH3-205ENST00000566808 TTLL13PA6NNM8 815 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 H7C4K7 107 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 CCNT1O60563 726 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 GJA1P17302 382 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 HOXC13P31276 330 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 BRCC3P46736 316 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 ARPP19P56211 112 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 CCT2P78371 535 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 SSRP1Q08945 709 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 TWF1Q12792 350 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 TEAD2Q15562 447 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 MAPK6Q16659 721 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 TCEAL6Q6IPX3 200 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 SHKBP1Q8TBC3 707 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 ZCCHC14Q8WYQ9 949 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 TCEAL3Q969E4 200 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 JAKMIP1Q96N16 626 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 EIF2AK1Q9BQI3 630 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 GOLGA2P5Q9HBQ8 144 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 CEP72Q9P209 647 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 LHX6Q9UPM6 363 aa18.5■□□□□ 0.55
CDH3-205ENST00000566808 HELZ2Q9BYK8 2649 aaKnown RBP18.5■□□□□ 0.55
CDH3-205ENST00000566808 ASH1LQ9NR48 2969 aaKnown RBP18.49■□□□□ 0.55
CDH3-205ENST00000566808 GIPC1O14908 333 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 EXTL3O43909 919 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 PON2Q15165 354 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 MCPH1Q8NEM0 835 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 GPRC5CQ9NQ84 441 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 AFF4Q9UHB7 1163 aaKnown RBP18.49■□□□□ 0.55
CDH3-205ENST00000566808 FBXL5Q9UKA1 691 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 ATG2BQ96BY7 2078 aa18.49■□□□□ 0.55
CDH3-205ENST00000566808 BAG4O95429 457 aaKnown RBP18.48■□□□□ 0.55
CDH3-205ENST00000566808 SPINK2P20155 84 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 PDIA3P30101 505 aaKnown RBP18.48■□□□□ 0.55
CDH3-205ENST00000566808 PXNP49023 591 aaPredicted RBP18.48■□□□□ 0.55
CDH3-205ENST00000566808 RING1Q06587 406 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 ARHGAP29Q52LW3 1261 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 DAB2IPQ5VWQ8 1189 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 HAUS6Q7Z4H7 955 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 HSD17B14Q9BPX1 270 aa18.48■□□□□ 0.55
CDH3-205ENST00000566808 SMG1Q96Q15 3661 aaKnown RBP18.48■□□□□ 0.55
CDH3-205ENST00000566808 ACKR2O00590 384 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 EVCP57679 992 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 MRPL58Q14197 206 aaKnown RBP18.47■□□□□ 0.55
CDH3-205ENST00000566808 ELF2Q15723 593 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 CTXN3Q4LDR2 81 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 SH3PXD2AQ5TCZ1 1133 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 EEF1DP3Q658K8 133 aa18.47■□□□□ 0.55
CDH3-205ENST00000566808 ZNF280DQ6N043 979 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms