RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.44
CDH1-210ENST00000566612 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.44
CDH1-210ENST00000566612 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 NDC80O14777 642 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 FAM107AO95990 144 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 RARAP10276 462 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 C1orf228Q6PIY5 440 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 RDM1Q8NG50 284 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 ALG3Q92685 438 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 SEC16BQ96JE7 1060 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 CLCN3P51790 818 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 CDH6P55285 790 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 CORO7P57737 925 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 CAV1Q03135 178 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 PPATQ06203 517 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 SPIRE1Q08AE8 756 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 ZNF844Q08AG5 666 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 AGBL2Q5U5Z8 902 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 TMC3Q7Z5M5 1100 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 VSIG10LQ86VR7 867 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 FEZF2Q8TBJ5 459 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 TGS1Q96RS0 853 aaKnown RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 PDGFDQ9GZP0 370 aaPredicted RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 SNX25Q9H3E2 840 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 STRIP2Q9ULQ0 834 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 RIPK3Q9Y572 518 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 CICQ96RK0 1608 aaPredicted RBP12.27□□□□□ -0.45
CDH1-210ENST00000566612 CRYBG1Q9Y4K1 1723 aa12.27□□□□□ -0.45
CDH1-210ENST00000566612 LCA5LO95447 670 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 AGTP01019 485 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 GARTP22102 1010 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 ARL4CP56559 192 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 SGSM1Q2NKQ1 1148 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 C4orf33Q8N1A6 199 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 SREK1Q8WXA9 508 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 STMN2Q93045 179 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 P2RX7Q99572 595 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 ACTR5Q9H9F9 607 aaPredicted RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 PCDHA2Q9Y5H9 948 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 UBIAD1Q9Y5Z9 338 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 TAF1P21675 1872 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 RPL21P46778 160 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 MYL6P60660 151 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 NEU2Q9Y3R4 380 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 MYH6P13533 1939 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 TMEM120BA0PK00 339 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 RBAK-RBAKDNI3L0D1 243 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 PCK1P35558 622 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 SESN3P58005 492 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 CCDC14Q49A88 953 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 ANO5Q75V66 913 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 UBA3Q8TBC4 463 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 TTC17Q96AE7 1141 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 ASTN2O75129 1339 aaPredicted RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 PEX10O60683 326 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 MAP3K6O95382 1288 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 CPP00450 1065 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 KRT7P08729 469 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 DSG3P32926 999 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 ASTE1Q2TB18 679 aaPredicted RBP12.26□□□□□ -0.45
CDH1-210ENST00000566612 ATF7IP2Q5U623 682 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 FKBP1CQ5VVH2 108 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 LLGL2Q6P1M3 1020 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 FOXR2Q6PJQ5 311 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 DCTN4Q9UJW0 460 aa12.26□□□□□ -0.45
CDH1-210ENST00000566612 FLT3P36888 993 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 GTF2BQ00403 316 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 MXD4Q14582 209 aaPredicted RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 MAP4K3Q8IVH8 894 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 TRAPPC12Q8WVT3 735 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 ASNSD1Q9NWL6 643 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 PHLPP1O60346 1717 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 KIAA0391O15091 583 aaKnown RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 CST8O60676 142 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 CCNE2O96020 404 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 PDE1BQ01064 536 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SPARCL1Q14515 664 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms