RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	HIPK3	Q9H422	1215 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	SEPT11	Q9NVA2	429 aa	Known RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	TBX21	Q9UL17	535 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	GINS2	Q9Y248	185 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279		A0A0B4J269	797 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	CYP26A1	O43174	497 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	KIF4A	O95239	1232 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	CHRNB2	P17787	502 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	USP8	P40818	1118 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ACOT2	P49753	483 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	TRIM71	Q2Q1W2	868 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ZNF484	Q5JVG2	852 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ZNF618	Q5T7W0	954 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	IER5	Q5VY09	327 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	NOP9	Q86U38	636 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	RPUSD2	Q8IZ73	545 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	EPS8L1	Q8TE68	723 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	RFFL	Q8WZ73	363 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ELMO3	Q96BJ8	720 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ARHGEF26	Q96DR7	871 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	MSTO1	Q9BUK6	570 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	FUT8	Q9BYC5	575 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	CCDC113	Q9H0I3	377 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ABCB6	Q9NP58	842 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	ANKFY1	Q9P2R3	1169 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	RNF14	Q9UBS8	474 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	PTPRJ	Q12913	1337 aa		10.89	□□□□□ -0.67
TCF4-231	ENST00000566279	RRN3P2	A6NIE6	340 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	TTLL13P	A6NNM8	815 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ERLIN1	O75477	346 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	GNAT1	P11488	350 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	CKB	P12277	381 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ABCB4	P21439	1286 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PAFAH1B1	P43034	410 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PLA2G4A	P47712	749 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	MLLT1	Q03111	559 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	LAMTOR4	Q0VGL1	99 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	RPS6KA1	Q15418	735 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ZACN	Q401N2	412 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	CFAP221	Q4G0U5	840 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	SLC47A2	Q86VL8	602 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	TCP11	Q8WWU5	503 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	TATDN2	Q93075	761 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PCDHB18P	Q96TA0	734 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PI4K2A	Q9BTU6	479 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	THAP2	Q9H0W7	228 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	CDHR5	Q9HBB8	845 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PDE11A	Q9HCR9	933 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	OSGEP	Q9NPF4	335 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	STXBP5L	Q9Y2K9	1186 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	COL1A2	P08123	1366 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	RANBP2	P49792	3224 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	FAM170A	A1A519	330 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ANKRD62	A6NC57	917 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	CES2	O00748	559 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	GAS2	O43903	313 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	C4BPA	P04003	597 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	RAG1	P15918	1043 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	EFNA5	P52803	228 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	PTK7	Q13308	1070 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	TDRD10	Q5VZ19	366 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ZPBP2	Q6X784	338 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	KIAA0319L	Q8IZA0	1049 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	SLC35G2	Q8TBE7	412 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	BAD	Q92934	168 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	FNBP1	Q96RU3	617 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ISCU	Q9H1K1	167 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	ACP6	Q9NPH0	428 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	RBM12	Q9NTZ6	932 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	RBAK	Q9NYW8	714 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	AKT3	Q9Y243	479 aa		10.88	□□□□□ -0.67
TCF4-231	ENST00000566279	MAP2K7	O14733	419 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	FAM189A1	O60320	539 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	BUB1B	O60566	1050 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CSDE1	O75534	798 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	LDHA	P00338	332 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CYP11B1	P15538	503 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	FMO1	Q01740	532 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	GCNT1	Q02742	428 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	MXD4	Q14582	209 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	MBTPS1	Q14703	1052 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	PTPRO	Q16827	1216 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	KIZ	Q2M2Z5	673 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	TAF3	Q5VWG9	929 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	TRAF7	Q6Q0C0	670 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	NT5DC3	Q86UY8	548 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	SYCE1	Q8N0S2	351 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	LINC01465	Q8N7H1	131 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	TAF4B	Q92750	862 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	L1RE1	Q9UN81	338 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	COG5	Q9UP83	839 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CNTNAP2	Q9UHC6	1331 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279		H0YGN5	161 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	KCNK3	O14649	394 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	ZMYND10	O75800	440 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms