RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 BRCA1P38398 1863 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 B4GALT4O60513 344 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 ITGA10O75578 1167 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 SBK3P0C264 359 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 CYP2C19P33261 490 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 ETV4P43268 484 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 NEK3P51956 506 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 PTTG1IPP53801 180 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 DSC2Q02487 901 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 MUM1L1Q5H9M0 696 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 ABHD8Q96I13 439 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 COG3Q96JB2 828 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 CCDC136Q96JN2 1154 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 GPHA2Q96T91 129 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 CSRNP2Q9H175 543 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 NCDNQ9UBB6 729 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 PNMA8BQ9ULN7 279 aaPredicted RBP5.12□□□□□ -1.59
LINC00561-201ENST00000565815 FRMPD2Q68DX3 1309 aaPredicted RBP5.12□□□□□ -1.59
LINC00561-201ENST00000565815 TPP1O14773 563 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 CUTAO60888 179 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 RPS6KA4O75676 772 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 DPEP1P16444 411 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 HOXC9P31274 260 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 MAP3K12Q12852 859 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 AGBL4Q5VU57 503 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 BTNL9Q6UXG8 535 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 Q6ZUG5 572 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 XYLT1Q86Y38 959 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 PNISRQ8TF01 805 aaKnown RBP5.12□□□□□ -1.59
LINC00561-201ENST00000565815 EP400Q96L91 3159 aa5.12□□□□□ -1.59
LINC00561-201ENST00000565815 NUAK1O60285 661 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 CTNND1O60716 968 aaKnown RBP5.11□□□□□ -1.59
LINC00561-201ENST00000565815 ALDH1A2O94788 518 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 MTHFD2P13995 350 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 MAP2K6P52564 334 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 ADAM8P78325 824 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 CLEC14AQ86T13 490 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 DGKHQ86XP1 1220 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 SLC35B2Q8TB61 432 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 CFHR4Q92496 578 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 MVB12AQ96EY5 273 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 ADAM7Q9H2U9 754 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 GREM2Q9H772 168 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 AGO3Q9H9G7 860 aaKnown RBP5.11□□□□□ -1.59
LINC00561-201ENST00000565815 TRPS1Q9UHF7 1281 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 CTDP1Q9Y5B0 961 aaPredicted RBP5.11□□□□□ -1.59
LINC00561-201ENST00000565815 TOGARAM1Q9Y4F4 1720 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 OFD1O75665 1012 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 RFC4P35249 363 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 PHKA1P46020 1223 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 ALDH1A3P47895 512 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 MGAT2Q10469 447 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 GFOD2Q3B7J2 385 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 MINDY4Q4G0A6 757 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 PRAMEF14Q5SWL7 426 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 ANKS6Q68DC2 871 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 AIFM3Q96NN9 605 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 CGRRF1Q99675 332 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 TMEM168Q9H0V1 697 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 BHMT2Q9H2M3 363 aa5.11□□□□□ -1.59
LINC00561-201ENST00000565815 AJAP1Q9UKB5 411 aaPredicted RBP5.11□□□□□ -1.59
LINC00561-201ENST00000565815 FOXN1O15353 648 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 TRIM13O60858 407 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 TSPAN15O95858 294 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 SARSP49591 514 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 BPIFB4P59827 614 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 GNRHR2Q96P88 292 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ADI1Q9BV57 179 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ARNT2Q9HBZ2 717 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 RBM12Q9NTZ6 932 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 TMOD3Q9NYL9 352 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 MAP2P11137 1827 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 SBF1O95248 1867 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 A0A0G2JLW4 131 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 SH3D21A4FU49 640 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 FARP2O94887 1054 aaPredicted RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 DEKP35659 375 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 HGFACQ04756 655 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 CCDC184Q52MB2 194 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 CXorf57Q6NSI4 855 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 DPP8Q6V1X1 898 aaPredicted RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 KBTBD2Q8IY47 623 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 FEZF2Q8TBJ5 459 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 FAM84AQ96KN4 292 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 MAP3K14Q99558 947 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 PCDHA3Q9Y5H8 950 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ACTL7AQ9Y615 435 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 NCAPD2Q15021 1401 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 MEGF6O75095 1541 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 VIRMAQ69YN4 1812 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ERVV-2B6SEH9 535 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 UBXN7O94888 489 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 HSPA8P11142 646 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 SREBF1P36956 1147 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 LINC01356Q8N9X3 169 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms