RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ADCY4Q8NFM4 1077 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 FAM76AQ8TAV0 307 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 RNF139Q8WU17 664 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 FAM193BQ96PV7 902 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 WDR24Q96S15 920 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 TUBA1CQ9BQE3 449 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 C1QTNF1Q9BXJ1 281 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 B3GNT5Q9BYG0 378 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 BHMT2Q9H2M3 363 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SEPSECSQ9HD40 501 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 DONSONQ9NYP3 566 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SSX2IPQ9Y2D8 614 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ATP11BQ9Y2G3 1177 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 KLHL20Q9Y2M5 609 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PCDHB14Q9Y5E9 798 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PCDHA9Q9Y5H5 950 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 IBTKQ9P2D0 1353 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 FRMPD3Q5JV73 1810 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 USP42Q9H9J4 1324 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 EME2A4GXA9 379 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 MASP2O00187 686 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 RANBP6O60518 1105 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 SRGAP2O75044 1071 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 IDH1O75874 414 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 DNAJC8O75937 253 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 BEST1O76090 585 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 MMP10P09238 476 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SRGAP2CP0DJJ0 459 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CKMT1AP12532 417 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 GNL1P36915 607 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 ADCYAP1R1P41586 468 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ASMTP46597 345 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 GSK3AP49840 483 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PEX5P50542 639 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 DCAF7P61962 342 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 GUCY1A3Q02108 690 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CHAF1BQ13112 559 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 KLF1Q13351 362 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 GRM2Q14416 872 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 LBRQ14739 615 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 FAM26FQ5R3K3 315 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 RNF220Q5VTB9 566 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 FYB2Q5VWT5 728 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 NEK5Q6P3R8 708 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 IYDQ6PHW0 289 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 LEKR1Q6ZMV7 388 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 TOM1L2Q6ZVM7 507 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CEP68Q76N32 757 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 MARK2Q7KZI7 788 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 DDX53Q86TM3 631 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 MTDHQ86UE4 582 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 RIN2Q8WYP3 895 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 MRPS27Q92552 414 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 STAMQ92783 540 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 TUBGCP3Q96CW5 907 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CABS1Q96KC9 395 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SLC52A2Q9HAB3 445 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 AIPL1Q9NZN9 384 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 BCS1LQ9Y276 419 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 MRPL11Q9Y3B7 192 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 ZFP37Q9Y6Q3 630 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 TAF1P21675 1872 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 KMT2EQ8IZD2 1858 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 M0QX08 132 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ACKR2O00590 384 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 GGPS1O95749 300 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ALDH1A1P00352 501 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CYP1A2P05177 515 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PSAPP07602 524 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CES1P23141 567 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 LONP1P36776 959 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 PAFAH1B1P43034 410 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PSMA6P60900 246 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 PPP2R2AP63151 447 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 IFI35P80217 286 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 TSTA3Q13630 321 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 TAF7Q15545 349 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 ZRSR1Q15695 479 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 TSTQ16762 297 aaKnown RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 ZNF423Q2M1K9 1284 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PET117Q6UWS5 81 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ZNF783Q6ZMS7 281 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ALDH16A1Q8IZ83 802 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 IL17RDQ8NFM7 739 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 OR52K2Q8NGK3 314 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SLC30A5Q8TAD4 765 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SLC7A14Q8TBB6 771 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CCDC110Q8TBZ0 833 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ST7LQ8TDW4 575 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SNX29Q8TEQ0 813 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PRCCQ92733 491 aaPredicted RBP3.3□□□□□ -1.88
CHD9-216ENST00000565803 EXT2Q93063 718 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 NCLNQ969V3 563 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ATP6V1G3Q96LB4 118 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 FGD4Q96M96 766 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 AGAP3Q96P47 875 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 ASB2Q96Q27 587 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 PALMDQ9NP74 551 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CABP5Q9NP86 173 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms