RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 LMBRD2Q68DH5 695 aaPredicted RBP20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 PHLDB3Q6NSJ2 640 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 WDR59Q6PJI9 974 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 TRAPPC11Q7Z392 1133 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 DEFB128Q7Z7B8 93 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 OR5B17Q8NGF7 314 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 SNTG2Q9NY99 539 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 PYCARDQ9ULZ3 195 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 BZW2Q9Y6E2 419 aaKnown RBP20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 SPTBN5Q9NRC6 3674 aaKnown RBP20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 PITPNM1O00562 1244 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 SELPP16109 830 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 STAT1P42224 750 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 RAB27AP51159 221 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 MFAP3P55082 362 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 TFAMQ00059 246 aaKnown RBP20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 GCNT1Q02742 428 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 NCOA4Q13772 614 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 TMEM132DQ14C87 1099 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 SKIV2LQ15477 1246 aaKnown RBP20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 TRAF7Q6Q0C0 670 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 EFCAB13Q8IY85 973 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 CCDC170Q8IYT3 715 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 TAF4BQ92750 862 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 SNX27Q96L92 541 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 IMPG2Q9BZV3 1241 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 UBE2TQ9NPD8 197 aaPredicted RBP20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 KCND1Q9NSA2 647 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 C1orf112Q9NSG2 853 aa20.54■□□□□ 0.88
CSPG4P13-201ENST00000565545 CCP110O43303 1012 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 VNN1O95497 513 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 SERPING1P05155 500 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 PFKMP08237 780 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 GHRP10912 638 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 SKIP12755 728 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 FERP16591 822 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 CD52P31358 61 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 TRPC3Q13507 836 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 RAPGEF1Q13905 1077 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 ASIC2Q16515 512 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 SGSM1Q2NKQ1 1148 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 JADE1Q6IE81 842 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 ALKAL1Q6UXT8 129 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 JAKMIP2Q96AA8 810 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 FAXDC2Q96IV6 333 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 MTMR12Q9C0I1 747 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 IPPQ9Y573 584 aa20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 PDCD11Q14690 1871 aaKnown RBP20.53■□□□□ 0.88
CSPG4P13-201ENST00000565545 TRIP11Q15643 1979 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 SSU72P8A0A1W2PR75 194 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 MEFVO15553 781 aaPredicted RBP20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 ZNF623O75123 536 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 RECQL4O94761 1208 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 PARNO95453 639 aaKnown RBP20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 NFICP08651 508 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 SOX5P35711 763 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 DSC3Q14574 896 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 DRAP1Q14919 205 aaPredicted RBP20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 XKR4Q5GH76 650 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 GJB7Q6PEY0 223 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 LRRC8DQ7L1W4 858 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 ARHGEF19Q8IW93 802 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 SMG8Q8ND04 991 aaKnown RBP20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 NXF3Q9H4D5 531 aaKnown RBP20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 FAM105AQ9NUU6 356 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 CNTN3Q9P232 1028 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 PCDHB2Q9Y5E7 798 aa20.52■□□□□ 0.88
CSPG4P13-201ENST00000565545 F8VZ95 297 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 XPOTO43592 962 aaKnown RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 ASS1P00966 412 aaKnown RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 TBXAS1P24557 533 aaPredicted RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 ANXA13P27216 316 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 CYLC1P35663 651 aaPredicted RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 PRKCIP41743 596 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 MAPK8IP2Q13387 824 aaPredicted RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 MRPL10Q7Z7H8 261 aaKnown RBP20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 PPM1KQ8N3J5 372 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 HELQQ8TDG4 1101 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 CHP1Q99653 195 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 ITGA11Q9UKX5 1188 aa20.51■□□□□ 0.87
CSPG4P13-201ENST00000565545 SOWAHDA6NJG2 315 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 ZNF500O60304 480 aaPredicted RBP20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 KCNE1P15382 129 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 ATICP31939 592 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 ZBTB6Q15916 424 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 AAK1Q2M2I8 961 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 CCDC42Q96M95 316 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 FTHL17Q9BXU8 183 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 NHEJ1Q9H9Q4 299 aaPredicted RBP20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 CERS4Q9HA82 394 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 PARP2Q9UGN5 583 aa20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 AJAP1Q9UKB5 411 aaPredicted RBP20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 UBQLN1Q9UMX0 589 aaKnown RBP20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
CSPG4P13-201ENST00000565545 EPN1Q9Y6I3 576 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms