RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 PAGR1Q9BTK6 254 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FRMD8P1Q9BZ68 369 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TMCC3Q9ULS5 477 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TTC37Q6PGP7 1564 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 KIAA0391O15091 583 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 CAND2O75155 1236 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 SNRPAP09012 282 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 CD58P19256 250 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CALB2P22676 271 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 BCAP31P51572 246 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 GYS2P54840 703 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 KCNK10P57789 538 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 LRRC74AQ0VAA2 488 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 LRRC36Q1X8D7 754 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 LINC00523Q86TU6 105 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ZNF786Q8N393 782 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ARL8AQ96BM9 186 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 WDR35Q9P2L0 1181 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CLCA2Q9UQC9 943 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 MYH8P13535 1937 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 TAF4O00268 1085 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 SARSP49591 514 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 CENPCQ03188 943 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 USP39Q53GS9 565 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 UGT3A1Q6NUS8 523 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CDC73Q6P1J9 531 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 STKLD1Q8NE28 680 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 REXO4Q9GZR2 422 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 SARS2Q9NP81 518 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 FBXO28Q9NVF7 368 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 STK39Q9UEW8 545 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 SFNP31947 248 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 POP5Q969H6 163 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 PGBD4Q96DM1 585 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 APOL6Q9BWW8 343 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 UBXN6Q9BZV1 441 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 DDX47Q9H0S4 455 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 RMND5AQ9H871 391 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 SP110Q9HB58 689 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 DMAP1Q9NPF5 467 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 MRPL39Q9NYK5 338 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 PLEKHG1Q9ULL1 1385 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 NR3C1P04150 777 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 RPS8P62241 208 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 KLHL24Q6TFL4 600 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.561e-7■□□□□ 8.6
SMG1-211ENST00000565324 GRID1Q9ULK0 1009 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 KIF20BQ96Q89 1820 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 PLB1Q6P1J6 1458 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 MLH3Q9UHC1 1453 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 KCNN4O15554 427 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ZNF862O60290 1169 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CBFA2T3O75081 653 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 NQO1P15559 274 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 RESTQ13127 1097 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 DPY19L2Q6NUT2 758 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 KLHL17Q6TDP4 642 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ARHGEF38Q9NXL2 777 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 PVALEFA0A1B0GWK0 134 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 WWP2O00308 870 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 TM9SF1O15321 606 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 IRAK1P51617 712 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 KCTD2Q14681 263 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 OASLQ15646 514 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 MAPK6Q16659 721 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 FAM83BQ5T0W9 1011 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 RNF135Q8IUD6 432 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ZNF594Q96JF6 807 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 TNIP3Q96KP6 325 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 HEMGNQ9BXL5 484 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 ILKAPQ9H0C8 392 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 VCPKMTQ9H867 229 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 FKBP14Q9NWM8 211 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 HERC5Q9UII4 1024 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 TSC22D2O75157 780 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 GCP02774 474 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 FTLP02792 175 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 CNTFP26441 200 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CDH6P55285 790 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 CHRNB3Q05901 458 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 PUDPQ08623 228 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 STX4Q12846 297 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 C2CD6Q53TS8 623 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 SDR42E1Q8WUS8 393 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 PTPRN2Q92932 1015 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 FAM20AQ96MK3 541 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 C2orf40Q9H1Z8 148 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 RNPEPQ9H4A4 650 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 AVENQ9NQS1 362 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 HSPBP1Q9NZL4 362 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 DYNC1LI2O43237 492 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 SESN2P58004 480 aaPredicted RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 PTH1RQ03431 593 aa5.32□□□□□ -1.56
SMG1-211ENST00000565324 R3HDM1Q15032 1099 aaKnown RBP5.32□□□□□ -1.56
SMG1-211ENST00000565324 STILQ15468 1287 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms