RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 BRCC3P46736 316 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 CASP4P49662 377 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 AP3M2P53677 418 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 DSG1Q02413 1049 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 CREMQ03060 361 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-208ENST00000564703 INTS8Q75QN2 995 aaKnown RBP17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PPFIBP1Q86W92 1011 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 APPL2Q8NEU8 664 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 TMC2Q8TDI7 906 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 NELFBQ8WX92 580 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-208ENST00000564703 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 VN1R3Q9BXE9 311 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 DACH1Q9UI36 760 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 ITGA11Q9UKX5 1188 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 AGAP1Q9UPQ3 857 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PDCD11Q14690 1871 aaKnown RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 ANO9A1A5B4 782 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 FGFR1OPO95684 399 aaKnown RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 EFEMP2O95967 443 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 BMP6P22004 513 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 TAF6P49848 677 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 VAMP7P51809 220 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 WNT7BP56706 349 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 LILRA4P59901 499 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 MYO1EQ12965 1108 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 PAK1Q13153 545 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 TRPC3Q13507 836 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 ZCWPW2Q504Y3 356 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 LMBRD2Q68DH5 695 aaPredicted RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 ANKS3Q6ZW76 656 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 RNF168Q8IYW5 571 aaPredicted RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 HLA-CQ95604 372 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 SUSD3Q96L08 255 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 ZNF560Q96MR9 790 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 POP1Q99575 1024 aaKnown RBP17.25■□□□□ 0.35
RAB40C-208ENST00000564703 MKNK1Q9BUB5 465 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 MTMR12Q9C0I1 747 aa17.25■□□□□ 0.35
RAB40C-208ENST00000564703 H7C4K7 107 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 I3L4J1 428 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 IKBKBO14920 756 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 SYN3O14994 580 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 AKAP3O75969 853 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 ITGB3P05106 788 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 ADH1AP07327 375 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 FGFR3P22607 806 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 HYAL1Q12794 435 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 DUSP6Q16828 381 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 SV2CQ496J9 727 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 B3GALT6Q96L58 329 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 KLHL5Q96PQ7 755 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 CLDND1Q9NY35 253 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 COG5Q9UP83 839 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 CTNND2Q9UQB3 1225 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 ANK1P16157 1881 aa17.24■□□□□ 0.35
RAB40C-208ENST00000564703 CHD7Q9P2D1 2997 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 KPNA7A9QM74 516 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 STX10O60499 249 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
RAB40C-208ENST00000564703 IGFBP6P24592 240 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-208ENST00000564703 POLR2BP30876 1174 aaKnown RBP17.23■□□□□ 0.35
RAB40C-208ENST00000564703 PMS1P54277 932 aaKnown RBP17.23■□□□□ 0.35
RAB40C-208ENST00000564703 STX17P56962 302 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 NLRP12P59046 1061 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 ADAM15Q13444 863 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 BIRC3Q13489 604 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 PSMD5Q16401 504 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 ELMSAN1Q6PJG2 1045 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 TRAPPC11Q7Z392 1133 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 METTL23Q86XA0 190 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 EFHBQ8N7U6 833 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 OR5B17Q8NGF7 314 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 PIK3R5Q8WYR1 880 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
RAB40C-208ENST00000564703 CEP63Q96MT8 703 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 RXFP1Q9HBX9 757 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 DPP7Q9UHL4 492 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
RAB40C-208ENST00000564703 M0QZQ0 153 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 CYB561D2O14569 222 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 LILRB3O75022 631 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms