RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ZBTB6Q15916 424 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 PSMD5Q16401 504 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 SPATA1Q5VX52 437 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 CES5AQ6NT32 575 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 KANK3Q6NY19 840 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 PDXDC1Q6P996 788 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 ELMSAN1Q6PJG2 1045 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 CRELD2Q6UXH1 353 aaPredicted RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 HS2ST1Q7LGA3 356 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 PALB2Q86YC2 1186 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 GPD1LQ8N335 351 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 C12orf76Q8N812 135 aaPredicted RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 ZSWIM2Q8NEG5 633 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 LNX1Q8TBB1 728 aaPredicted RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 PIK3R5Q8WYR1 880 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 FBXL18Q96ME1 805 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 RBAKQ9NYW8 714 aaPredicted RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 FNIP2Q9P278 1114 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 DPP7Q9UHL4 492 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 DERAQ9Y315 318 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 USP15Q9Y4E8 981 aaPredicted RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 PDCD11Q14690 1871 aaKnown RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 ZNF233A6NK53 670 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 SYN3O14994 580 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 CLIC2O15247 247 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 SSTR3P32745 418 aaPredicted RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 SNRPFP62306 86 aaKnown RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 TFAMQ00059 246 aaKnown RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 DPYDQ12882 1025 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 STK4Q13043 487 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 BMT2Q1RMZ1 405 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 RARS2Q5T160 578 aaKnown RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 DSTYKQ6XUX3 929 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 ANKS3Q6ZW76 656 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 BRSK2Q8IWQ3 736 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 SUSD3Q96L08 255 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 S1PR5Q9H228 398 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 AGPAT3Q9NRZ7 376 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 C2CD2Q9Y426 696 aa10.77□□□□□ -0.69
CDH1-206ENST00000564676 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.69
CDH1-206ENST00000564676 UNC80Q8N2C7 3258 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 VWA8A3KMH1 1905 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 NCOR1O75376 2440 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 H7C4K7 107 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 TGFB1I1O43294 461 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 TGM5O43548 720 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 KIF20AO95235 890 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 SPATA31D3P0C874 917 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 CYP2J2P51589 502 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 ITIH3Q06033 890 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 SURF1Q15526 300 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 ATAT1Q5SQI0 421 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
CDH1-206ENST00000564676 C9orf57Q5W0N0 161 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 TMC5Q6UXY8 1006 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 SPATA31D4Q6ZUB0 917 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 NT5DC4Q86YG4 428 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 EFCAB13Q8IY85 973 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 FMR1NBQ8N0W7 255 aaPredicted RBP10.76□□□□□ -0.69
CDH1-206ENST00000564676 RDH13Q8NBN7 331 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 APPL2Q8NEU8 664 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 GOLGA5Q8TBA6 731 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
CDH1-206ENST00000564676 CLSTN3Q9BQT9 956 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 ADAM7Q9H2U9 754 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 SFXN1Q9H9B4 322 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 KIAA1586Q9HCI6 787 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 DPP3Q9NY33 737 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 CGNQ9P2M7 1197 aaKnown RBP10.76□□□□□ -0.69
CDH1-206ENST00000564676 PRKAG3Q9UGI9 489 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 ANK1P16157 1881 aa10.76□□□□□ -0.69
CDH1-206ENST00000564676 A0A0C4DFX4 3053 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 TNFRSF10AO00220 468 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 PIRO00625 290 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 PPEF2O14830 753 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 ADAM12O43184 909 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 RHOBTB3O94955 611 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 OR1D2P34982 312 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 MTHFRP42898 656 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 ARPP19P56211 112 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 WNT7BP56706 349 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 SNW1Q13573 536 aaKnown RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 KCNB1Q14721 858 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 CTXN3Q4LDR2 81 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 USP37Q86T82 979 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 CBWD2Q8IUF1 395 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 ADHFE1Q8IWW8 467 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 GJD3Q8N144 294 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 XXYLT1Q8NBI6 393 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms