RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 SF3B3Q15393 1217 aaKnown RBP3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 SDE2Q6IQ49 451 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 NPM2Q86SE8 214 aaKnown RBP3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 RHOT1Q8IXI2 618 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 FITM2Q8N6M3 262 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 Q8NA96 180 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 NSUN7Q8NE18 718 aaKnown RBP3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 ACTRT2Q8TDY3 377 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 SSH3Q8TE77 659 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 CASKIN2Q8WXE0 1202 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 PDLIM2Q96JY6 352 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 TLR10Q9BXR5 811 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 SLKQ9H2G2 1235 aaPredicted RBP3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 SEMA4GQ9NTN9 838 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 ASB6Q9NWX5 421 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 KCTD5Q9NXV2 234 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 FAM30AQ9NZY2 134 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 LRIT1Q9P2V4 623 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 FRMD4BQ9Y2L6 1034 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 PCDHA13Q9Y5I0 950 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 GPR45Q9Y5Y3 372 aa3.42□□□□□ -1.86
SUB1P3-201ENST00000564581 CADPSQ9ULU8 1353 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 POU3F3P20264 500 aaPredicted RBP3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 AGXTP21549 392 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 SLC5A3P53794 718 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 CLUL1Q15846 466 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 TAF7LQ5H9L4 462 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 SLC9A6Q92581 669 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 PNKPQ96T60 521 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 SETD1BQ9UPS6 1966 aaKnown RBP3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 SYNJ2O15056 1496 aa3.41□□□□□ -1.86
SUB1P3-201ENST00000564581 TRGV11A0A075B6L2 103 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 AGFG2O95081 481 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 C1RP00736 705 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 ELFN1P0C7U0 828 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 GATA3P23771 443 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 HSD3B2P26439 372 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 CACNA2D1P54289 1103 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 CREMQ03060 361 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 TARDBPQ13148 414 aaKnown RBP eCLIP3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 CD300EQ496F6 205 aaPredicted RBP3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 FLYWCH1Q4VC44 716 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 UTP14CQ5TAP6 766 aaKnown RBP3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 GLCCI1Q86VQ1 547 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 SPATS2Q86XZ4 545 aaKnown RBP3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 LNX2Q8N448 690 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 ATL2Q8NHH9 583 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC30A5Q8TAD4 765 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 NUP133Q8WUM0 1156 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 TFAP2BQ92481 460 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 TMEM125Q96AQ2 219 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 TMX3Q96JJ7 454 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 C7orf25Q9BPX7 421 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 TUBD1Q9UJT1 453 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC45A2Q9UMX9 530 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 CDYLQ9Y232 598 aa3.4□□□□□ -1.87
SUB1P3-201ENST00000564581 MYADML2A6NDP7 307 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 FAM171A2A8MVW0 826 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 GRM6O15303 877 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 YY2O15391 372 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 TEX33O43247 280 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 PEX1O43933 1283 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 ALAS1P13196 640 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 ZNF280AP59817 542 aaPredicted RBP3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 IL10RAQ13651 578 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 AKNAD1Q5T1N1 836 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 COLGALT2Q8IYK4 626 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 LPIN2Q92539 896 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 CYFIP2Q96F07 1278 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 LRIG1Q96JA1 1093 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 C11orf54Q9H0W9 315 aaPredicted RBP3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 MANSC1Q9H8J5 431 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 ZNF277Q9NRM2 450 aaPredicted RBP3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 DMTF1Q9Y222 760 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 CEP164Q9UPV0 1460 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 WASHC2AQ641Q2 1341 aa3.39□□□□□ -1.87
SUB1P3-201ENST00000564581 CPEP16870 476 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 IARSP41252 1262 aaKnown RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 FOLR3P41439 243 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 ABCG1P45844 678 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 MAPK10P53779 464 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 PROK1P58294 105 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 CTXN1P60606 82 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 MC2RQ01718 297 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 FPGSQ05932 587 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 FAPQ12884 760 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 FOXF2Q12947 444 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 KLF1Q13351 362 aaPredicted RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 DACT2Q5SW24 774 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 GJC2Q5T442 439 aaPredicted RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 LRCH2Q5VUJ6 765 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 VWA1Q6PCB0 445 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 PGM2L1Q6PCE3 622 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 KRT26Q7Z3Y9 468 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 PEG10Q86TG7 708 aaKnown RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 SH2D3CQ8N5H7 860 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 CNTD1Q8N815 330 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 TOR1AIP2Q8NFQ8 470 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 JADE3Q92613 823 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms