RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZNF280DQ6N043 979 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 ELMOD1Q8N336 334 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 SECISBP2LQ93073 1101 aaKnown RBP15.42■□□□□ 0.06
CDR2-204ENST00000564542 C18orf25Q96B23 403 aaPredicted RBP15.42■□□□□ 0.06
CDR2-204ENST00000564542 SUSD3Q96L08 255 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 ASB16Q96NS5 453 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 TCHPQ9BT92 498 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 RUSC1Q9BVN2 902 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 FAM126AQ9BYI3 521 aaPredicted RBP15.42■□□□□ 0.06
CDR2-204ENST00000564542 BRD9Q9H8M2 597 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 MAFFQ9ULX9 164 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 DNM3Q9UQ16 869 aa15.42■□□□□ 0.06
CDR2-204ENST00000564542 TICRRQ7Z2Z1 1910 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 NCOR2Q9Y618 2525 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 MAN2B1O00754 1011 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 MEFVO15553 781 aaPredicted RBP15.41■□□□□ 0.06
CDR2-204ENST00000564542 MCM4P33991 863 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 MTAPQ13126 283 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 MAPK7Q13164 816 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 PTGDRQ13258 359 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 GRM2Q14416 872 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 CYP4A22Q5TCH4 519 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 IQCEQ6IPM2 695 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 TSSK4Q6SA08 328 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 LEMD2Q8NC56 503 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 APPL2Q8NEU8 664 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 SMARCD2Q92925 531 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 IRF7Q92985 503 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 IER2Q9BTL4 223 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 TRMT61BQ9BVS5 477 aaKnown RBP15.41■□□□□ 0.06
CDR2-204ENST00000564542 TIPINQ9BVW5 301 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 CHRDQ9H2X0 955 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 TRPV5Q9NQA5 729 aa15.41■□□□□ 0.06
CDR2-204ENST00000564542 AFF4Q9UHB7 1163 aaKnown RBP15.41■□□□□ 0.06
CDR2-204ENST00000564542 LAD1O00515 517 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 NRG2O14511 850 aaPredicted RBP15.4■□□□□ 0.06
CDR2-204ENST00000564542 TOM1L1O75674 476 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
CDR2-204ENST00000564542 PSMC3P17980 439 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 SDHBP21912 280 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.064e-6■□□□□ 8.3
CDR2-204ENST00000564542 EPHA5P54756 1037 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 TWF1Q12792 350 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 NOLC1Q14978 699 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDR2-204ENST00000564542 KRT79Q5XKE5 535 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 VITQ6UXI7 678 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 C1orf186Q6ZWK4 172 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 MAP4K3Q8IVH8 894 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 DEPDC1BQ8WUY9 529 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 DDX12PQ92771 950 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 ZNF334Q9HCZ1 680 aaPredicted RBP15.4■□□□□ 0.06
CDR2-204ENST00000564542 ASAH2Q9NR71 780 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 CEP72Q9P209 647 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 ANKFY1Q9P2R3 1169 aa15.4■□□□□ 0.06
CDR2-204ENST00000564542 NDRG2Q9UN36 371 aaKnown RBP15.4■□□□□ 0.06
CDR2-204ENST00000564542 PP2D1A8MPX8 630 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 SLC16A4O15374 487 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 MOSPD3O75425 235 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 TDGF1P13385 188 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 CPB1P15086 417 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 GUCY2CP25092 1073 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 GDI1P31150 447 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 PRPHP41219 470 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
CDR2-204ENST00000564542 LMNB2Q03252 620 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 STRN3Q13033 797 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 PPP2R5DQ14738 602 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 SLC10A6Q3KNW5 377 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 SPIRE2Q8WWL2 714 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 ZBTB45Q96K62 511 aaPredicted RBP15.39■□□□□ 0.05
CDR2-204ENST00000564542 ZNF512Q96ME7 567 aaPredicted RBP15.39■□□□□ 0.05
CDR2-204ENST00000564542 ZSWIM3Q96MP5 696 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 NTPCRQ9BSD7 190 aaKnown RBP15.39■□□□□ 0.05
CDR2-204ENST00000564542 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 TUBGCP4Q9UGJ1 667 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 PCDHB8Q9UN66 801 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 PIAS3Q9Y6X2 628 aa15.39■□□□□ 0.05
CDR2-204ENST00000564542 MYL4P12829 197 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 NRLP54845 237 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 ZPBP2Q6X784 338 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 RNF19BQ6ZMZ0 732 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 BEST2Q8NFU1 509 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
CDR2-204ENST00000564542 FAM3CQ92520 227 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 MMTAG2Q9BU76 263 aaKnown RBP15.38■□□□□ 0.05
CDR2-204ENST00000564542 OXCT2Q9BYC2 517 aaPredicted RBP15.38■□□□□ 0.05
CDR2-204ENST00000564542 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 YIPF1Q9Y548 306 aa15.38■□□□□ 0.05
CDR2-204ENST00000564542 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.38■□□□□ 0.05
CDR2-204ENST00000564542 MYH11P35749 1972 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 PRR5-ARHGAP8B1AHC4 643 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 M0QZQ0 153 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms