RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 THTPAQ9BU02 230 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 MKNK1Q9BUB5 465 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 TUBB6Q9BUF5 446 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 NUP85Q9BW27 656 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 TMEM120AQ9BXJ8 343 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 RAD21O60216 631 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 MED24O75448 989 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ENO1P06733 434 aaKnown RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 CRABP2P29373 138 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 C6orf163Q5TEZ5 329 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 C12orf50Q8NA57 414 aaPredicted RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 PANX3Q96QZ0 392 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 CCDC28BQ9BUN5 200 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 MAK16Q9BXY0 300 aaKnown RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 OSBPL8Q9BZF1 889 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 INTS2Q9H0H0 1204 aaKnown RBP13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ACP6Q9NPH0 428 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 APEX2Q9UBZ4 518 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ZNF711Q9Y462 761 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 RREB1Q92766 1687 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CIB2O75838 187 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 RARBP10826 455 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 KDSRQ06136 332 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 PTK6Q13882 451 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 C12orf60Q5U649 245 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 PCNX4Q63HM2 1172 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CD101Q93033 1021 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 RUSC1Q9BVN2 902 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 SAP30BPQ9UHR5 308 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CYP2J2P51589 502 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 KLC3Q6P597 504 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 ACAD11Q709F0 780 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 SCUBE1Q8IWY4 988 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 OR6Y1Q8NGX8 325 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CCDC110Q8TBZ0 833 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CFAP57Q96MR6 1250 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 HERPUD2Q9BSE4 406 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 UBE2TQ9NPD8 197 aaPredicted RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 R3HDM2Q9Y2K5 976 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 GTPBP10A4D1E9 387 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 SLC12A3P55017 1021 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 MAP3K10Q02779 954 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CAV1Q03135 178 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 MTMR2Q13614 643 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 LPCAT4Q643R3 524 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CATSPER2Q96P56 530 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 ARHGEF38Q9NXL2 777 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 CIDEBQ9UHD4 219 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
SCAMP2-204ENST00000563829 A0A1B0GUL6 1792 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 SORBS3O60504 671 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 COG2Q14746 738 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 TSSK1BQ9BXA7 367 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 NMUR2Q9GZQ4 415 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 PAIP2BQ9ULR5 123 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 FCHO1O14526 889 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 TYROBPO43914 113 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 EIF4BP23588 611 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 KLRK1P26718 216 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 PSMC2P35998 433 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 CDK16Q00536 496 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 PLOD1Q02809 727 aaPredicted RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 DLG1Q12959 904 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 ALYREFQ86V81 257 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 LZICQ8WZA0 190 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
SCAMP2-204ENST00000563829 FSCN2O14926 492 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 PLSCR1O15162 318 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 SLC16A3O15427 465 aaKnown RBP13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 MYL2P10916 166 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 RGS2P41220 211 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 RASA2Q15283 850 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
SCAMP2-204ENST00000563829 TMEM259Q4ZIN3 620 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms