RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 LRRC3BQ96PB8 259 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 EPN3Q9H201 632 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 FBRSL1Q9HCM7 1045 aaKnown RBP12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 TMPRSS4Q9NRS4 437 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 ADAM28Q9UKQ2 775 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 ZFC3H1O60293 1989 aaKnown RBP12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 NR1I2O75469 434 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 LRG1P02750 347 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 APPP05067 770 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 SFTPCP11686 197 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 MRPL10Q7Z7H8 261 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 DHX40Q8IX18 779 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 TM7SF3Q9NS93 570 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 AKT3Q9Y243 479 aa12.06□□□□□ -0.48
HDGFL3-204ENST00000563790 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 KLK10O43240 276 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 HOXB4P17483 251 aaPredicted RBP12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 ZNF33AQ06730 810 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 SCRN1Q12765 414 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 CYP4A22Q5TCH4 519 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 ARID3BQ8IVW6 561 aaPredicted RBP12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 KCNE4Q8WWG9 221 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
HDGFL3-204ENST00000563790 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 GPC3P51654 580 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 CLCN3P51790 818 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 CLDN6P56747 220 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 BYSLQ13895 437 aaKnown RBP12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 LINC01465Q8N7H1 131 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 EZH1Q92800 747 aaPredicted RBP12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 ZNF578Q96N58 590 aaPredicted RBP12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 MAP7D2Q96T17 732 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 IL21RQ9HBE5 538 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 SLC9A2Q9UBY0 812 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 BTBD3Q9Y2F9 522 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
HDGFL3-204ENST00000563790 SF3B1O75533 1304 aaKnown RBP eCLIP12.04□□□□□ -0.484e-7■■■■■ 133.7
HDGFL3-204ENST00000563790 PKD1L1Q8TDX9 2849 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 WIPF3A6NGB9 483 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 GPAA1O43292 621 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 ORC4O43929 436 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 CILPO75339 1184 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 OR1D2P34982 312 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 ACTR2P61160 394 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 PTH1RQ03431 593 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 C1QL3Q5VWW1 255 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 ZNF668Q96K58 619 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 OBP2AQ9NY56 170 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 PIN4Q9Y237 131 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 PCDHGA1Q9Y5H4 931 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
HDGFL3-204ENST00000563790 KIF26BQ2KJY2 2108 aa12.02□□□□□ -0.48
HDGFL3-204ENST00000563790 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 BCAR3O75815 825 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 CER1O95813 267 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 CDK4P11802 303 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 GJA1P17302 382 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 GALK1P51570 392 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 EPHA5P54756 1037 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 INHBCP55103 352 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 TEAD2Q15562 447 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 TTC14Q96N46 770 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 GAREM1Q9H706 876 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 GMIPQ9P107 970 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 ACANP16112 2415 aa12.02□□□□□ -0.49
HDGFL3-204ENST00000563790 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 C8BP07358 591 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 COL8A1P27658 744 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 OXCT1P55809 520 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 AMPD2Q01433 879 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms