RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CBX8Q9HC52 389 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 FANCLQ9NW38 375 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 MARCH5Q9NX47 278 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 STK39Q9UEW8 545 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 ADAM28Q9UKQ2 775 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 AGAP1Q9UPQ3 857 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 PLXNA4Q9HCM2 1894 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 SF3B1O75533 1304 aaKnown RBP eCLIP20.29■□□□□ 0.841e-6■■■■■ 94.1
RAB40C-207ENST00000563109 TRIOBPQ9H2D6 2365 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 ANO9A1A5B4 782 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 GOLGA6L19H0YKK7 550 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 SOX1O00570 391 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-207ENST00000563109 FGF18O76093 207 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 PAX3P23760 479 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 PIK3CAP42336 1068 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 MCCD1P59942 119 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-207ENST00000563109 NCAPHQ15003 741 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 ZACNQ401N2 412 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 SV2CQ496J9 727 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 TCP11X2Q5H9J9 407 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 C1orf220Q5T0J3 134 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 ZNF697Q5TEC3 545 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 CDKAL1Q5VV42 579 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 TDRD10Q5VZ19 366 aaKnown RBP20.29■□□□□ 0.84
RAB40C-207ENST00000563109 KRT39Q6A163 491 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 SPRED2Q7Z698 418 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 IRF2BP1Q8IU81 584 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 LRRC52Q8N7C0 313 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 KLHL23Q8NBE8 558 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 HASPINQ8TF76 798 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 ZNF516Q92618 1163 aa20.29■□□□□ 0.84
RAB40C-207ENST00000563109 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
RAB40C-207ENST00000563109 PIRO00625 290 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 C4BPAP04003 597 aaKnown RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 PRKCSHP14314 528 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 TAF6P49848 677 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 MYL7Q01449 175 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 PLCB3Q01970 1234 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 PPP3CAQ08209 521 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 ELAVL2Q12926 359 aaKnown RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 IQCB1Q15051 598 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 MAN2A1Q16706 1144 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 SV2AQ7L0J3 742 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 TMEM173Q86WV6 379 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-207ENST00000563109 LRCH3Q96II8 777 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 SIX4Q9UIU6 781 aa20.28■□□□□ 0.84
RAB40C-207ENST00000563109 ARHGEF37A1IGU5 675 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 F8W810 466 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 PPEF2O14830 753 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 UBE3AQ05086 875 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 CETN1Q12798 172 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 KCNH2Q12809 1159 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 GPM6BQ13491 265 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 NCOA4Q13772 614 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 FUT10Q6P4F1 479 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 LUZP1Q86V48 1076 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 TMEM130Q8N3G9 435 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 CCDC150Q8NCX0 1101 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 C3orf58Q8NDZ4 430 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 BCL7CQ8WUZ0 217 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-207ENST00000563109 TUBGCP2Q9BSJ2 902 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 IMPG2Q9BZV3 1241 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 LZTS1Q9Y250 596 aa20.27■□□□□ 0.84
RAB40C-207ENST00000563109 H3BNC9 293 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 ITGB1P05556 798 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 ATICP31939 592 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 FMO5P49326 533 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 DSTYKQ6XUX3 929 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 C15orf39Q6ZRI6 1047 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 DDX53Q86TM3 631 aaKnown RBP20.26■□□□□ 0.83
RAB40C-207ENST00000563109 HPDLQ96IR7 371 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 SCN1AP35498 2009 aa20.26■□□□□ 0.83
RAB40C-207ENST00000563109 PES1O00541 588 aaKnown RBP20.25■□□□□ 0.83
RAB40C-207ENST00000563109 P4HA2O15460 535 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 HLA-DRAP01903 254 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 ZNF18P17022 549 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 LILRA4P59901 499 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 BMS1Q14692 1282 aaKnown RBP20.25■□□□□ 0.83
RAB40C-207ENST00000563109 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 CBWD6Q4V339 395 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 CBWD3Q5JTY5 395 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 CBWD5Q5RIA9 395 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 GPR153Q6NV75 609 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 FBXL13Q8NEE6 735 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 CXorf38Q8TB03 319 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 GDPD5Q8WTR4 605 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 HERC2P3Q9BVR0 1158 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 ALG13Q9NP73 1137 aaKnown RBP20.25■□□□□ 0.83
RAB40C-207ENST00000563109 TAB2Q9NYJ8 693 aa20.25■□□□□ 0.83
RAB40C-207ENST00000563109 RANBP2P49792 3224 aaKnown RBP20.25■□□□□ 0.83
RAB40C-207ENST00000563109 KPNA7A9QM74 516 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 VNN1O95497 513 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 SOD2P04179 222 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 ODC1P11926 461 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 BRCC3P46736 316 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 MYL6P60660 151 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms