RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 KIF4AO95239 1232 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 CST3P01034 146 aaPredicted RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 TRIM49P0CI25 452 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TRIM49CP0CI26 452 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 PNPLA4P41247 253 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 GUCY2FP51841 1108 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 LILRA4P59901 499 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 UBE3AQ05086 875 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 IQCB1Q15051 598 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TCP11X2Q5H9J9 407 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 KRT39Q6A163 491 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TMEM173Q86WV6 379 aaPredicted RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 CREBRFQ8IUR6 639 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 AOPEPQ8N6M6 819 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 LRRC52Q8N7C0 313 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 ARNTL2Q8WYA1 636 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TMEM169Q96HH4 297 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 TTYH1Q9H313 450 aaPredicted RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 TSPY26PQ9H489 355 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 CERS4Q9HA82 394 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 SIX4Q9UIU6 781 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 PRG3Q9Y2Y8 225 aaPredicted RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
CDH11-205ENST00000562882 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDH11-205ENST00000562882 COL6A3P12111 3177 aa13.75□□□□□ -0.21
CDH11-205ENST00000562882 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 LRRC10BA6NIK2 292 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 BECN2A8MW95 431 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 F8W810 466 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 PHACTR2O75167 634 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 ITGB1P05556 798 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 KRT19P08727 400 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 PRKCSHP14314 528 aaPredicted RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 POLR2BP30876 1174 aaKnown RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 ATICP31939 592 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 GCLMP48507 274 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 MYO1EQ12965 1108 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 GPM6BQ13491 265 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 TMEM130Q8N3G9 435 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 BCL7CQ8WUZ0 217 aaPredicted RBP13.74□□□□□ -0.21
CDH11-205ENST00000562882 HSD3B7Q9H2F3 369 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 CBX8Q9HC52 389 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
CDH11-205ENST00000562882 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDH11-205ENST00000562882 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 PPEF2O14830 753 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 P4HA2O15460 535 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 VNN1O95497 513 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 STAU1O95793 577 aaKnown RBP13.73□□□□□ -0.21
CDH11-205ENST00000562882 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
CDH11-205ENST00000562882 ZNF18P17022 549 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
CDH11-205ENST00000562882 FMO5P49326 533 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDH11-205ENST00000562882 TAF6P49848 677 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 BIRC3Q13489 604 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 TRPC3Q13507 836 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 NCOA4Q13772 614 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 SV2CQ496J9 727 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 ZNF697Q5TEC3 545 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 SCARA3Q6AZY7 606 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
CDH11-205ENST00000562882 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 FAM84AQ96KN4 292 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 TUBGCP2Q9BSJ2 902 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 GPR62Q9BZJ7 368 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 VRTNQ9H8Y1 702 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
CDH11-205ENST00000562882 GDAP2Q9NXN4 497 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 COQ4Q9Y3A0 265 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
CDH11-205ENST00000562882 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
CDH11-205ENST00000562882 M0QZQ0 153 aa13.72□□□□□ -0.21
CDH11-205ENST00000562882 SPTLC1O15269 473 aa13.72□□□□□ -0.21
CDH11-205ENST00000562882 GRM6O15303 877 aa13.72□□□□□ -0.21
CDH11-205ENST00000562882 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
CDH11-205ENST00000562882 SOD2P04179 222 aa13.72□□□□□ -0.21
CDH11-205ENST00000562882 CDK11BP21127 795 aaKnown RBP13.72□□□□□ -0.21
CDH11-205ENST00000562882 MXI1P50539 228 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms