RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 NEK4P51957 841 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 NRLP54845 237 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 PEX3P56589 373 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 ST3GAL1Q11201 340 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
BBS4-205ENST00000562219 ECM1Q16610 540 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 CYP4A22Q5TCH4 519 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 IQCEQ6IPM2 695 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 ZNF280DQ6N043 979 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 LEMD2Q8NC56 503 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 SUSD3Q96L08 255 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 DDX19AQ9NUU7 478 aaKnown RBP11.24□□□□□ -0.61
BBS4-205ENST00000562219 CNTN3Q9P232 1028 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 LRWD1Q9UFC0 647 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 GMEB2Q9UKD1 530 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 MAFFQ9ULX9 164 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 NDRG2Q9UN36 371 aaKnown RBP11.24□□□□□ -0.61
BBS4-205ENST00000562219 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 EPG5Q9HCE0 2579 aa11.24□□□□□ -0.61
BBS4-205ENST00000562219 ACACBO00763 2458 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 ABLIM1O14639 778 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 PROZP22891 400 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 MCM4P33991 863 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 TRAPPC10P48553 1259 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 ATXN1P54253 815 aaKnown RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 EPHA5P54756 1037 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 MPZL3Q6UWV2 235 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 VITQ6UXI7 678 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 APPL2Q8NEU8 664 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 DEPDC1BQ8WUY9 529 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 C18orf25Q96B23 403 aaPredicted RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 DRC1Q96MC2 740 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 ZSWIM3Q96MP5 696 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 KMT5AQ9NQR1 393 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 AFF4Q9UHB7 1163 aaKnown RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 RAB23Q9ULC3 237 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 RBM19Q9Y4C8 960 aaKnown RBP11.23□□□□□ -0.61
BBS4-205ENST00000562219 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
BBS4-205ENST00000562219 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
BBS4-205ENST00000562219 HIP1RO75146 1068 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 MYL4P12829 197 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 CPB1P15086 417 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 TGM1P22735 817 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 GDI1P31150 447 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 CCR3P51677 355 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 EML5Q05BV3 1969 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 TWF1Q12792 350 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
BBS4-205ENST00000562219 PDIA5Q14554 519 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
BBS4-205ENST00000562219 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 DAW1Q8N136 415 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 IGSF22Q8N9C0 903 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
BBS4-205ENST00000562219 FAM3CQ92520 227 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 DDX12PQ92771 950 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 ZNF512Q96ME7 567 aaPredicted RBP11.22□□□□□ -0.61
BBS4-205ENST00000562219 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 RTKNQ9BST9 563 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 RUSC1Q9BVN2 902 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 RAB34Q9BZG1 259 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 C17orf75Q9HAS0 396 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 TRPV4Q9HBA0 871 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 CEP72Q9P209 647 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 NOL7Q9UMY1 257 aaKnown RBP11.22□□□□□ -0.61
BBS4-205ENST00000562219 DNM3Q9UQ16 869 aa11.22□□□□□ -0.61
BBS4-205ENST00000562219 NCANO14594 1321 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 E9PMD0 336 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 ARNTLO00327 626 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 ZNF263O14978 683 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 MEFVO15553 781 aaPredicted RBP11.21□□□□□ -0.61
BBS4-205ENST00000562219 MOSPD3O75425 235 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 TOM1L1O75674 476 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 HARSP12081 509 aaKnown RBP11.21□□□□□ -0.61
BBS4-205ENST00000562219 VIPR2P41587 438 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 MAPK7Q13164 816 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 NBR1Q14596 966 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 LAIR1Q6GTX8 287 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 C1orf228Q6PIY5 440 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
BBS4-205ENST00000562219 C4orf32Q8N8J7 132 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 BEST2Q8NFU1 509 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms