RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 SYCP3Q8IZU3 236 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 KIFAP3Q92845 792 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 MKL1Q969V6 931 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 NACC1Q96RE7 527 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 SYT15Q9BQS2 421 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 CCDC28BQ9BUN5 200 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
BBS4-204ENST00000562084 FAM192AQ9GZU8 254 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 CHST7Q9NS84 486 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 SUGT1Q9Y2Z0 365 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
BBS4-204ENST00000562084 EXOC1LA0A1B0GW35 172 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 GSTTP1A0A1W2PQM5 241 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 SGPL1O95470 568 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 MAGEA4P43358 317 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 RPS6KA3P51812 740 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 FMO1Q01740 532 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 CDR2Q01850 454 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 PPP2R5CQ13362 524 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 SNX1Q13596 522 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 GNPTABQ3T906 1256 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 ODR4Q5SWX8 454 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 SYDE2Q5VT97 1194 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 ZNF746Q6NUN9 644 aaPredicted RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 C4orf50Q6ZRC1 276 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 DHX37Q8IY37 1157 aaKnown RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 SHC3Q92529 594 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 TRIM11Q96F44 468 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 PAIP2Q9BPZ3 127 aaKnown RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 TRABDQ9H4I3 376 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 AVENQ9NQS1 362 aaPredicted RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 EML1O00423 815 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 PDHA1P08559 390 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 TROVE2P10155 538 aaKnown RBP eCLIP19.77■□□□□ 0.76
BBS4-204ENST00000562084 SHMT1P34896 483 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 DYNC1I2Q13409 638 aaKnown RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 CCDC6Q16204 474 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 ZC3H12AQ5D1E8 599 aaKnown RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 IZUMO3Q5VZ72 239 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 ACAD10Q6JQN1 1059 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 MMADHCQ9H3L0 296 aaPredicted RBP19.77■□□□□ 0.76
BBS4-204ENST00000562084 SLC24A2Q9UI40 661 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 DAGLAQ9Y4D2 1042 aa19.77■□□□□ 0.76
BBS4-204ENST00000562084 DICER1Q9UPY3 1922 aaKnown RBP19.76■□□□□ 0.75
BBS4-204ENST00000562084 SPDYE5A6NIY4 337 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 SIGLEC16A6NMB1 481 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 HGSO14964 777 aaPredicted RBP19.76■□□□□ 0.75
BBS4-204ENST00000562084 ZBED4O75132 1171 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 SLITRK3O94933 977 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 MYBL1P10243 752 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 ZNF76P36508 570 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 GSTA3Q16772 222 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 SLC5A9Q2M3M2 681 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 CLEC10AQ8IUN9 316 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 IFT43Q96FT9 208 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 NMRK1Q9NWW6 199 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 RGL1Q9NZL6 768 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 C2CD2Q9Y426 696 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 COL4A5P29400 1685 aa19.76■□□□□ 0.75
BBS4-204ENST00000562084 ATMINO43313 823 aaPredicted RBP19.75■□□□□ 0.75
BBS4-204ENST00000562084 HLA-DOAP06340 250 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 MAPK4P31152 587 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 HHATQ5VTY9 493 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 OR52E8Q6IFG1 317 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 NLRP9Q7RTR0 991 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 PPFIBP2Q8ND30 876 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 VPS33BQ9H267 617 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 BCAS3Q9H6U6 928 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 PDP2Q9P2J9 529 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 FETUBQ9UGM5 382 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 FOXO6A8MYZ6 492 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 AP1G2O75843 785 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 DOK7Q18PE1 504 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 TAF1BQ53T94 588 aaPredicted RBP19.75■□□□□ 0.75
BBS4-204ENST00000562084 ZNF449Q6P9G9 518 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 FBXO11Q86XK2 927 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 TPH2Q8IWU9 490 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 ARHGAP18Q8N392 663 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 TTC8Q8TAM2 541 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 DTNBP1Q96EV8 351 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 BTBD6Q96KE9 485 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 RBM15Q96T37 977 aaKnown RBP eCLIP19.75■□□□□ 0.75
BBS4-204ENST00000562084 BTBD10Q9BSF8 475 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 TIPINQ9BVW5 301 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 TRIM4Q9C037 500 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 IKZF4Q9H2S9 585 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 NYAP2Q9P242 653 aa19.75■□□□□ 0.75
BBS4-204ENST00000562084 MAGEA13PA6NCF6 341 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 PIK3CDO00329 1044 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 RRM1P23921 792 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 MXI1P50539 228 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 SLC34A1Q06495 639 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 PPP3CAQ08209 521 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 KLF1Q13351 362 aaPredicted RBP19.74■□□□□ 0.75
BBS4-204ENST00000562084 TNIP1Q15025 636 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 SEPT14Q6ZU15 432 aa19.74■□□□□ 0.75
BBS4-204ENST00000562084 CLNKQ7Z7G1 428 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms