RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 MCOLN2Q8IZK6 566 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ATG4AQ8WYN0 398 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 CCT6BQ92526 530 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 WNK4Q96J92 1243 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 FAM167BQ9BTA0 163 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 VWA5AO00534 786 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DIAPH2O60879 1101 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DGAT1O75907 488 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 GARTP22102 1010 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 NSFP46459 744 aaKnown RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 LIG4P49917 911 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 MCCD1P59942 119 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 TNFAIP1Q13829 316 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 TRIP13Q15645 432 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DNAJC14Q6Y2X3 702 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 VSIG10LQ86VR7 867 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 SMNDC1O75940 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 PSAPP07602 524 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DPEP1P16444 411 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 IFNAR2P48551 515 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 TRMT10CQ7L0Y3 403 aaKnown RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 TAOK1Q7L7X3 1001 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 CCDC63Q8NA47 563 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 CCDC197Q8NCU1 140 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 AGAP11Q8TF27 550 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 FAM81BQ96LP2 452 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 TMEM109Q9BVC6 243 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 POLR3FQ9H1D9 316 aaPredicted RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 CDC42EP4Q9H3Q1 356 aaKnown RBP11.67□□□□□ -0.54
NEIL1-202ENST00000561643 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
NEIL1-202ENST00000561643 ZC3H11AO75152 810 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 GAS8O95995 478 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 PIK3CAP42336 1068 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 PRKCEQ02156 737 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 LONRF1Q17RB8 773 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 CIAPIN1Q6FI81 312 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 LLGL2Q6P1M3 1020 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 PRMT1Q99873 361 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 XPNPEP1Q9NQW7 623 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 WHRNQ9P202 907 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 VIMP08670 466 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 PECAM1P16284 738 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 VPS41P49754 854 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 MTERF2Q49AM1 385 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 TRIM11Q96F44 468 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 JPH1Q9HDC5 661 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 AVENQ9NQS1 362 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 TELO2Q9Y4R8 837 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 MROH7Q68CQ1 1323 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 MAN1A1P33908 653 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 SLC1A1P43005 524 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 BPIFB4P59827 614 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 FAM133BQ5BKY9 247 aaKnown RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 DAB2IPQ5VWQ8 1189 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 CCDC60Q8IWA6 550 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 SNF8Q96H20 258 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 ZNF317Q96PQ6 595 aaPredicted RBP11.66□□□□□ -0.54
NEIL1-202ENST00000561643 SENP7Q9BQF6 1050 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 HEMGNQ9BXL5 484 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
NEIL1-202ENST00000561643 MAFGO15525 162 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 EXTL3O43909 919 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 HLA-DRAP01903 254 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ATF2P15336 505 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 KCNA2P16389 499 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ITIH2P19823 946 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 GJC1P36383 396 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ACOT2P49753 483 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 RAB27AP51159 221 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 RPS6KA3P51812 740 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 STRN3Q13033 797 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 SPOPLQ6IQ16 392 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ZNF677Q86XU0 584 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 PASD1Q8IV76 773 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
NEIL1-202ENST00000561643 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms