RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 VTNP04004 478 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 SERPING1P05155 500 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 TNNT1P13805 278 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 HOXC8P31273 242 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 RFC2P35250 354 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ACOT2P49753 483 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 GPC3P51654 580 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ADAM17P78536 824 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 CETN1Q12798 172 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 PTPN14Q15678 1187 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ASIC2Q16515 512 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 DNTTIP2Q5QJE6 756 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 ZBTB41Q5SVQ8 909 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ATF7IP2Q5U623 682 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 KRT39Q6A163 491 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 MPZL3Q6UWV2 235 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ZNF410Q86VK4 478 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 BRSK2Q8IWQ3 736 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 CCDC127Q96BQ5 260 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 ZNF668Q96K58 619 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 SPAG5Q96R06 1193 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 EIF3CQ99613 913 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 CGRRF1Q99675 332 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 FDXACB1Q9BRP7 624 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 PTPRHQ9HD43 1115 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 TOPORSQ9NS56 1045 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 TRMT13Q9NUP7 481 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 RBAKQ9NYW8 714 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 ARHGAP20Q9P2F6 1191 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 APEX2Q9UBZ4 518 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 AJAP1Q9UKB5 411 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 TNFSF13BQ9Y275 285 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 COQ4Q9Y3A0 265 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 REXO2Q9Y3B8 237 aaKnown RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 EPN1Q9Y6I3 576 aaPredicted RBP8.12□□□□□ -1.11
TPM1-231ENST00000561395 MYO15AQ9UKN7 3530 aa8.12□□□□□ -1.11
TPM1-231ENST00000561395 RIF1Q5UIP0 2472 aaKnown RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 KIAA1671Q9BY89 1806 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 F8VZ95 297 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 B4GALT5O43286 388 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 ZMYND10O75800 440 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 BAIAP3O94812 1187 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 LCA5LO95447 670 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 TUBB4AP04350 444 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 PLEKP08567 350 aaPredicted RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 IQCF3P0C7M6 154 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 DLATP10515 647 aaKnown RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 HARSP12081 509 aaKnown RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 EIF4A3P38919 411 aaKnown RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 WNT7BP56706 349 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 CDC42EP1Q00587 391 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 TCF15Q12870 199 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 HIC1Q14526 733 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 ASTE1Q2TB18 679 aaPredicted RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 ZNF568Q3ZCX4 644 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 EEF1DP3Q658K8 133 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 GJB7Q6PEY0 223 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 C15orf39Q6ZRI6 1047 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 SRGAP1Q7Z6B7 1085 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 TMCO2Q7Z6W1 182 aaPredicted RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 GPIHBP1Q8IV16 184 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 FMNL3Q8IVF7 1028 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 FBXL13Q8NEE6 735 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 TAS1R2Q8TE23 839 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 NLRP7Q8WX94 980 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 CCDC42Q96M95 316 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 FNBP1Q96RU3 617 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 STK33Q9BYT3 514 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 GPR88Q9GZN0 384 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 FAM49AQ9H0Q0 323 aaPredicted RBP8.11□□□□□ -1.11
TPM1-231ENST00000561395 CDT1Q9H211 546 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 ADAMTS10Q9H324 1103 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 PDZD7Q9H5P4 517 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 FAM86C1Q9NVL1 165 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 DNAJC12Q9UKB3 198 aa8.11□□□□□ -1.11
TPM1-231ENST00000561395 A0A0U1RQJ8 604 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 C17orf102A2RUQ5 167 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZNF263O14978 683 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 TREHO43280 583 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 TSPAN1O60635 241 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 GPR32O75388 356 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 MCF2P10911 925 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 GNAT1P11488 350 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 FERP16591 822 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ANXA13P27216 316 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 IRS1P35568 1242 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 SOX5P35711 763 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms