RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SCAPQ12770 1279 aa6□□□□□ -1.45
HERC1-213ENST00000561359 LRRC32Q14392 662 aa6□□□□□ -1.45
HERC1-213ENST00000561359 GRM2Q14416 872 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PPM1LQ5SGD2 360 aa6□□□□□ -1.45
HERC1-213ENST00000561359 LIN9Q5TKA1 542 aa6□□□□□ -1.45
HERC1-213ENST00000561359 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
HERC1-213ENST00000561359 TBC1D10CQ8IV04 446 aa6□□□□□ -1.45
HERC1-213ENST00000561359 CKAP2LQ8IYA6 745 aa6□□□□□ -1.45
HERC1-213ENST00000561359 ENAHQ8N8S7 591 aaPredicted RBP6□□□□□ -1.45
HERC1-213ENST00000561359 GAB3Q8WWW8 586 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PIBF1Q8WXW3 757 aa6□□□□□ -1.45
HERC1-213ENST00000561359 ING5Q8WYH8 240 aa6□□□□□ -1.45
HERC1-213ENST00000561359 DNASE1L2Q92874 299 aa6□□□□□ -1.45
HERC1-213ENST00000561359 MCRS1Q96EZ8 462 aa6□□□□□ -1.45
HERC1-213ENST00000561359 SDF4Q9BRK5 362 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PLA2G2FQ9BZM2 168 aa6□□□□□ -1.45
HERC1-213ENST00000561359 RXFP1Q9HBX9 757 aa6□□□□□ -1.45
HERC1-213ENST00000561359 TMEM9BQ9NQ34 198 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PIAS3Q9Y6X2 628 aa6□□□□□ -1.45
HERC1-213ENST00000561359 CFAP46Q8IYW2 2715 aa6□□□□□ -1.45
HERC1-213ENST00000561359 NEDD4P46934 1319 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 GREB1Q4ZG55 1949 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 COL1A2P08123 1366 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 PNMA6FA0A0J9YX94 578 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 LNP1A1A4G5 178 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 ZBTB42B2RXF5 422 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 M0R082 166 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 MAFGO15525 162 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 ARHGAP6O43182 974 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 CSDE1O75534 798 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 DDHD2O94830 711 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 PAPSS2O95340 614 aaPredicted RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 CAVIN2O95810 425 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 C1RP00736 705 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 HNRNPA1P09651 372 aaKnown RBP eCLIP5.99□□□□□ -1.45
HERC1-213ENST00000561359 DARSP14868 501 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 RPL17P18621 184 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 CCNE1P24864 410 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 TMOD1P28289 359 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 HOXA6P31267 233 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 HOXC13P31276 330 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 OR1G1P47890 313 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 PXNP49023 591 aaPredicted RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 SIM1P81133 766 aaPredicted RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 DSG1Q02413 1049 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 CREB5Q02930 508 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 SWI5Q1ZZU3 235 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 PABPC1LQ4VXU2 614 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 TANGO2Q6ICL3 276 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 Q6ZS52 159 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 CHCHD4Q8N4Q1 142 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 ZNF417Q8TAU3 575 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 PANK1Q8TE04 598 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 TNFRSF25Q93038 417 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 B3GALT6Q96L58 329 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 ZNF587Q96SQ5 575 aaPredicted RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 TMEM175Q9BSA9 504 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 TRMT61BQ9BVS5 477 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 SLC32A1Q9H598 525 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 CCDC86Q9H6F5 360 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 JADE2Q9NQC1 790 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.99□□□□□ -1.45
HERC1-213ENST00000561359 RBM12Q9NTZ6 932 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 MRPS23Q9Y3D9 190 aaKnown RBP5.99□□□□□ -1.45
HERC1-213ENST00000561359 RAI2Q9Y5P3 530 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 UBIAD1Q9Y5Z9 338 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 DOCK6Q96HP0 2047 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 MYH6P13533 1939 aa5.99□□□□□ -1.45
HERC1-213ENST00000561359 SPAG17Q6Q759 2223 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 PTPN13Q12923 2485 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 SPAARA0A1B0GVQ0 90 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 SPDYE3A6NKU9 549 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 B4E1Z4 1266 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 H0Y626 953 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 J3QKU1 62 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 C1QL1O75973 258 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 TRIM16O95361 564 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 POMCP01189 267 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 CAPNS1P04632 268 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 C8AP07357 584 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 GDI1P31150 447 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 KIF5BP33176 963 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 IDH3AP50213 366 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 CCINQ13939 588 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 ELF2Q15723 593 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 C11orf91Q3C1V1 193 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 PLK5Q496M5 336 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 IFIT1BQ5T764 474 aaKnown RBP5.98□□□□□ -1.45
HERC1-213ENST00000561359 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 LILRA6Q6PI73 481 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 LRRC71Q8N4P6 559 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 STK32AQ8WU08 396 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 ELSPBP1Q96BH3 223 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 PGBD4Q96DM1 585 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 UBL7Q96S82 380 aaPredicted RBP5.98□□□□□ -1.45
HERC1-213ENST00000561359 UBAC1Q9BSL1 405 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 ZFP14Q9HCL3 533 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 ZNF302Q9NR11 478 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 CHST12Q9NRB3 414 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms