RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 C1RP00736 705 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 FCER1AP12319 257 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 SLC6A4P31645 630 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 NHLH1Q02575 133 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 CREMQ03060 361 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 TARDBPQ13148 414 aaKnown RBP eCLIP4.97□□□□□ -1.61
CASC4-211ENST00000561305 HNRNPA0Q13151 305 aaKnown RBP4.97□□□□□ -1.61
CASC4-211ENST00000561305 ATP2B3Q16720 1220 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 KIAA0895LQ68EN5 471 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 RHOT1Q8IXI2 618 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 CBARPQ8N350 705 aaPredicted RBP4.97□□□□□ -1.61
CASC4-211ENST00000561305 CNTD1Q8N815 330 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 ACTRT2Q8TDY3 377 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 TUBD1Q9UJT1 453 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 INTUQ9ULD6 942 aa4.97□□□□□ -1.61
CASC4-211ENST00000561305 ARHGEF17Q96PE2 2063 aaPredicted RBP4.96□□□□□ -1.61
CASC4-211ENST00000561305 HAUS5O94927 633 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 MATN4O95460 622 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 CDC42EP1Q00587 391 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 ZKSCAN2Q63HK3 967 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 NECAB2Q7Z6G3 386 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 DDX42Q86XP3 938 aaKnown RBP eCLIP4.96□□□□□ -1.62
CASC4-211ENST00000561305 PPM1NQ8N819 430 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 SSH3Q8TE77 659 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 SLC5A4Q9NY91 659 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 VSX1Q9NZR4 365 aaPredicted RBP4.96□□□□□ -1.62
CASC4-211ENST00000561305 MCM8Q9UJA3 840 aa4.96□□□□□ -1.62
CASC4-211ENST00000561305 TRGV11A0A075B6L2 103 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 SBK3P0C264 359 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 SRGNP10124 158 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
CASC4-211ENST00000561305 FOLR3P41439 243 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 PABPC1LQ4VXU2 614 aaKnown RBP4.95□□□□□ -1.62
CASC4-211ENST00000561305 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.95□□□□□ -1.62
CASC4-211ENST00000561305 C1orf162Q8NEQ5 155 aaPredicted RBP4.95□□□□□ -1.62
CASC4-211ENST00000561305 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 IFI44Q8TCB0 444 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 JADE3Q92613 823 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 SPATA5L1Q9BVQ7 753 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 KIAA1586Q9HCI6 787 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 SLC17A6Q9P2U8 582 aa4.95□□□□□ -1.62
CASC4-211ENST00000561305 SAP30BPQ9UHR5 308 aaKnown RBP4.95□□□□□ -1.62
CASC4-211ENST00000561305 PRAMEF33A0A0G2JMD5 474 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 GRM6O15303 877 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PROM1O43490 865 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 SGTAO43765 313 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PEX1O43933 1283 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PRAMEF10O60809 474 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 NDUFS2O75306 463 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PROP1O75360 226 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 C5AR1P21730 350 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 LMO1P25800 156 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 SF3B3Q15393 1217 aaKnown RBP4.94□□□□□ -1.62
CASC4-211ENST00000561305 CLUL1Q15846 466 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 LRCH2Q5VUJ6 765 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 VWA1Q6PCB0 445 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PGM2L1Q6PCE3 622 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 RSPH3Q86UC2 560 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 MRGPRX4Q96LA9 322 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 TLR10Q9BXR5 811 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 TDP1Q9NUW8 608 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 CTTNBP2NLQ9P2B4 639 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 IPPQ9Y573 584 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
CASC4-211ENST00000561305 INO80B-WBP1J3KQ70 363 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 SLC43A1O75387 559 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 AGFG2O95081 481 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 KCNA2P16389 499 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
CASC4-211ENST00000561305 UTP14CQ5TAP6 766 aaKnown RBP4.93□□□□□ -1.62
CASC4-211ENST00000561305 MIGA2Q7L4E1 593 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 CLNKQ7Z7G1 428 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 ARHGEF25Q86VW2 580 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 RAB24Q969Q5 203 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 HDAC10Q969S8 669 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 FAXDC2Q96IV6 333 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 INO80BQ9C086 356 aaPredicted RBP4.93□□□□□ -1.62
CASC4-211ENST00000561305 KLK15Q9H2R5 256 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 INTS13Q9NVM9 706 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 JKAMPQ9P055 326 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 FRMD4BQ9Y2L6 1034 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 NEU2Q9Y3R4 380 aa4.93□□□□□ -1.62
CASC4-211ENST00000561305 LRRC3CA6NJW4 275 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 YY2O15391 372 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 MPPED1O15442 326 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 HTRA2O43464 458 aaPredicted RBP4.92□□□□□ -1.62
CASC4-211ENST00000561305 PCDHGA12O60330 932 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 RBMXL2O75526 392 aaKnown RBP4.92□□□□□ -1.62
CASC4-211ENST00000561305 EDNRBP24530 442 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 SLC16A1P53985 500 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 RPS7P62081 194 aaKnown RBP4.92□□□□□ -1.62
CASC4-211ENST00000561305 KRT85P78386 507 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 DYRK1AQ13627 763 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 RAB39AQ14964 217 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 FLYWCH1Q4VC44 716 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 ZNF384Q8TF68 577 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 KLHL32Q96NJ5 620 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 DMRTA2Q96SC8 542 aa4.92□□□□□ -1.62
CASC4-211ENST00000561305 HEPHQ9BQS7 1158 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms