RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 C1RP00736 705 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 PNOCQ13519 176 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 MRPL58Q14197 206 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 SMAD2Q15796 467 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 RSPO2Q6UXX9 243 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 CBWD2Q8IUF1 395 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 BEST2Q8NFU1 509 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 SPATA20Q8TB22 786 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 FEZF2Q8TBJ5 459 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 ADAMTS19Q8TE59 1207 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 SUSD6Q92537 303 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 DMAC2Q9NW81 257 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 ADH1AP07327 375 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 PSMD5Q16401 504 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 C9orf57Q5W0N0 161 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 NT5DC4Q86YG4 428 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 C12orf76Q8N812 135 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 TMEM174Q8WUU8 243 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 PDE11AQ9HCR9 933 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 CGNQ9P2M7 1197 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 MTRRQ9UBK8 725 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 USP15Q9Y4E8 981 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 C5orf42Q9H799 3197 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 SCN1AP35498 2009 aa16.55■□□□□ 0.24
SNRPA1-213ENST00000560856 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 M0QZQ0 153 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 SYN3O14994 580 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 SPTLC1O15269 473 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 TGM5O43548 720 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 PAPLNO95428 1278 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 SRGAP2BP0DMP2 458 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 LILRA4P59901 499 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 HS2ST1Q7LGA3 356 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 ELOA2Q8IYF1 753 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 BORCS6Q96GS4 357 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 KIAA1586Q9HCI6 787 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 DZANK1Q9NVP4 752 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 DPP3Q9NY33 737 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 CDH22Q9UJ99 828 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 BACE2Q9Y5Z0 518 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 BDP1A6H8Y1 2624 aa16.54■□□□□ 0.24
SNRPA1-213ENST00000560856 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PLXNA3P51805 1871 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PDXKO00764 312 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 GLUD1P00367 558 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 MCM4P33991 863 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 CYP2J2P51589 502 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 CREMQ03060 361 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 RAB33AQ14088 237 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 VARS2Q5ST30 1063 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 ANKS3Q6ZW76 656 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PALB2Q86YC2 1186 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 SLC9A9Q8IVB4 645 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 XXYLT1Q8NBI6 393 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 UHRF1Q96T88 793 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 APOL5Q9BWW9 433 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 CD320Q9NPF0 282 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PCDHB8Q9UN66 801 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 PCDHA5Q9Y5H7 936 aa16.53■□□□□ 0.24
SNRPA1-213ENST00000560856 SPATA31D3P0C874 917 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 SNRNP35Q16560 246 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 SPATA31D4Q6ZUB0 917 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 GUF1Q8N442 669 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 C1orf127Q8N9H9 656 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 RDH13Q8NBN7 331 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 OR5B17Q8NGF7 314 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 GOLGA5Q8TBA6 731 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 CCDC47Q96A33 483 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 MFSD14AQ96MC6 490 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 ADAM7Q9H2U9 754 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 INTS13Q9NVM9 706 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
SNRPA1-213ENST00000560856 MUC3AQ02505 3323 aa16.52■□□□□ 0.23
SNRPA1-213ENST00000560856 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 DLL1O00548 723 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 OR1D2P34982 312 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 ZP2Q05996 745 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 ITIH3Q06033 890 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 PSMD6Q15008 389 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms