RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ARHGEF37A1IGU5 675 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 FSCN2O14926 492 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 SYN3O14994 580 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 B3GAT3O94766 335 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 SOD2P04179 222 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 CYP11A1P05108 521 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 FGFR3P22607 806 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 OR1G1P47890 313 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 FXR1P51114 621 aaKnown RBP eCLIP13.07□□□□□ -0.32
IRF9-211ENST00000560852 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 SPAG1Q07617 926 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 MRPL58Q14197 206 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 C3orf58Q8NDZ4 430 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 TMEM169Q96HH4 297 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 VN1R3Q9BXE9 311 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 OXCT2Q9BYC2 517 aaPredicted RBP13.07□□□□□ -0.32
IRF9-211ENST00000560852 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
IRF9-211ENST00000560852 SF3B1O75533 1304 aaKnown RBP eCLIP13.07□□□□□ -0.32
IRF9-211ENST00000560852 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 TBC1D4O60343 1298 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 N4BP1O75113 896 aaKnown RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 TADA2AO75478 443 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 OAZ2O95190 189 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 KIF4AO95239 1232 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 VNN1O95497 513 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 CTSAP10619 480 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 TYMPP19971 482 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 CTNNB1P35222 781 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 DSG1Q02413 1049 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 GPM6BQ13491 265 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 SGSM1Q2NKQ1 1148 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 TCP11X2Q5H9J9 407 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 FUT10Q6P4F1 479 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 SPRED2Q7Z698 418 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 LRCH3Q96II8 777 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 GOLGA2P5Q9HBQ8 144 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 NGRNQ9NPE2 291 aaKnown RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 SAMSN1Q9NSI8 373 aaKnown RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 FANCLQ9NW38 375 aa13.06□□□□□ -0.32
IRF9-211ENST00000560852 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
IRF9-211ENST00000560852 KPNA7A9QM74 516 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 SPTLC1O15269 473 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 ASS1P00966 412 aaKnown RBP13.05□□□□□ -0.32
IRF9-211ENST00000560852 ITGB3P05106 788 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 FMO5P49326 533 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 TAF6P49848 677 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 KCNH2Q12809 1159 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 SV2CQ496J9 727 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
IRF9-211ENST00000560852 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
IRF9-211ENST00000560852 MRPL43Q8N983 215 aaKnown RBP13.05□□□□□ -0.32
IRF9-211ENST00000560852 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 LMO3Q8TAP4 145 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 PIK3R5Q8WYR1 880 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 MRPL38Q96DV4 380 aaKnown RBP13.05□□□□□ -0.32
IRF9-211ENST00000560852 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 ZBP1Q9H171 429 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 FNIP2Q9P278 1114 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.05□□□□□ -0.32
IRF9-211ENST00000560852 BACE2Q9Y5Z0 518 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
IRF9-211ENST00000560852 EPOPA6NHQ4 379 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 GABRDO14764 452 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 PPEF2O14830 753 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 GRM6O15303 877 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 TACC1O75410 805 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 PAPLNO95428 1278 aa13.04□□□□□ -0.32
IRF9-211ENST00000560852 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms