RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 N4BP2L1Q5TBK1 243 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-208ENST00000560514 EEF1DP3Q658K8 133 aa19.57■□□□□ 0.72
TSPAN3-208ENST00000560514 C3orf58Q8NDZ4 430 aa19.57■□□□□ 0.72
TSPAN3-208ENST00000560514 WASF1Q92558 559 aa19.57■□□□□ 0.72
TSPAN3-208ENST00000560514 CCDC94Q9BW85 323 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-208ENST00000560514 STK36Q9NRP7 1315 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 CHD6Q8TD26 2715 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 SMIM28A0A1B0GU29 152 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 PODXLO00592 558 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 EPB41L2O43491 1005 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 NEMFO60524 1076 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 PAPSS2O95340 614 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 SEC24AO95486 1093 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 PMLP29590 882 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 EFNA5P52803 228 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 TWF1Q12792 350 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 ATF7IP2Q5U623 682 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 CD300LGQ6UXG3 332 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 HS6ST3Q8IZP7 471 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 IFT74Q96LB3 600 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 TUFT1Q9NNX1 390 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-208ENST00000560514 SDK1Q7Z5N4 2213 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 ARHGEF35A5YM69 484 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 SLC38A8A6NNN8 435 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 K7ESF4 209 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 NRG2O14511 850 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 AXIN1O15169 862 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 GJA1P17302 382 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 SHC2P98077 582 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 ZNF280DQ6N043 979 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 BSNDQ8WZ55 320 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 CCDC113Q9H0I3 377 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 ARRDC1-AS1Q9H2J1 176 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 TRPV4Q9HBA0 871 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 FBXL5Q9UKA1 691 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 MAFFQ9ULX9 164 aa19.55■□□□□ 0.72
TSPAN3-208ENST00000560514 SPAG17Q6Q759 2223 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 CHADO15335 359 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 CPB1P15086 417 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 NR5A1Q13285 461 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 TEAD2Q15562 447 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 PADI6Q6TGC4 694 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 Q6ZS52 159 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 HAUS6Q7Z4H7 955 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 WDR5BQ86VZ2 330 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 AFF4Q9UHB7 1163 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 RALYQ9UKM9 306 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-208ENST00000560514 DPYSL4O14531 572 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 CYP11B2P19099 503 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 MARCKSP29966 332 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 SOX9P48436 509 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 OSTNP61366 133 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 SCRN1Q12765 414 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 SF3A2Q15428 464 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 RALGPS2Q86X27 583 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 CATSPER3Q86XQ3 398 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 APPL2Q8NEU8 664 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 LOXL4Q96JB6 756 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 CEP72Q9P209 647 aa19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 ORC3Q9UBD5 711 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-208ENST00000560514 SPECC1L-ADORA2AF8WAN1 911 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 K7ERI5 159 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 ARNTLO00327 626 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 MOSPD3O75425 235 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 EDN1P05305 212 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 ZNF806P0C7X5 589 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 SPATA31C1P0DKV0 1188 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 RPL9P32969 192 aaKnown RBP19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 MCM4P33991 863 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 GRM5P41594 1212 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 EPHA5P54756 1037 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 SOX4Q06945 474 aaPredicted RBP19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 PLD1Q13393 1074 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 CCDC6Q16204 474 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 ERMNQ8TAM6 284 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 KIFC3Q9BVG8 833 aa19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 SH2B1Q9NRF2 756 aaPredicted RBP19.52■□□□□ 0.72
TSPAN3-208ENST00000560514 CITO14578 2027 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 FAM208BQ5VWN6 2430 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 CCDC192P0DO97 292 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 HOXA6P31267 233 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 CTHP32929 405 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 PON2Q15165 354 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 ZNF568Q3ZCX4 644 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 NT5DC1Q5TFE4 455 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 STPG1Q5TH74 334 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 SYNPOQ8N3V7 929 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 KIFAP3Q92845 792 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 TNFSF13BQ9Y275 285 aa19.51■□□□□ 0.71
TSPAN3-208ENST00000560514 A0A1W2PRU2 124 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 MYBPHLA2RUH7 354 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 MED24O75448 989 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms