RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 LRRC52Q8N7C0 313 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 TUBGCP2Q9BSJ2 902 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 C11orf84Q9BUA3 381 aaPredicted RBP13.23□□□□□ -0.29
USP8-209ENST00000560297 GOLGA2P5Q9HBQ8 144 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
USP8-209ENST00000560297 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 NT5C1B-RDH14C9J2C7 533 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 FGF18O76093 207 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 CST3P01034 146 aaPredicted RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 KRT19P08727 400 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 GUCY2FP51841 1108 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 UBE3AQ05086 875 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 MAN2A1Q16706 1144 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 SGSM1Q2NKQ1 1148 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
USP8-209ENST00000560297 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 FBXO22Q8NEZ5 403 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 CXorf38Q8TB03 319 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 TAF4BQ92750 862 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 PAAF1Q9BRP4 392 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 ZNF576Q9H609 170 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
USP8-209ENST00000560297 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP8-209ENST00000560297 ARHGEF37A1IGU5 675 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 H3BNC9 293 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 ARHGEF15O94989 841 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 STAU1O95793 577 aaKnown RBP13.21□□□□□ -0.29
USP8-209ENST00000560297 PBX3P40426 434 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 FMO5P49326 533 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 TAF6P49848 677 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 MXI1P50539 228 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 LILRA4P59901 499 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 NCOA4Q13772 614 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
USP8-209ENST00000560297 SV2CQ496J9 727 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 HSP90AA4PQ58FG1 418 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
USP8-209ENST00000560297 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 RABGGTAQ92696 567 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.29
USP8-209ENST00000560297 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 COQ4Q9Y3A0 265 aa13.21□□□□□ -0.29
USP8-209ENST00000560297 KPNA7A9QM74 516 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 KIF4AO95239 1232 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 VNN1O95497 513 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 AARSP49588 968 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP8-209ENST00000560297 KRT31Q15323 416 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 CBWD6Q4V339 395 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 CBWD3Q5JTY5 395 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 CBWD5Q5RIA9 395 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 FUT10Q6P4F1 479 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 FAXDC2Q96IV6 333 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 VRTNQ9H8Y1 702 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 MARCH5Q9NX47 278 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 CACNG4Q9UBN1 327 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 MTUS1Q9ULD2 1270 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 FNDC1Q4ZHG4 1894 aaPredicted RBP13.2□□□□□ -0.3
USP8-209ENST00000560297 CITO14578 2027 aa13.2□□□□□ -0.3
USP8-209ENST00000560297 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 GTPBP10A4D1E9 387 aaKnown RBP13.19□□□□□ -0.3
USP8-209ENST00000560297 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
USP8-209ENST00000560297 SYN3O14994 580 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 EFEMP2O95967 443 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 ITGB1P05556 798 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 P4HA1P13674 534 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 MYL6P60660 151 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 MYL7Q01449 175 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 GPM6BQ13491 265 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
USP8-209ENST00000560297 TIGD5Q53EQ6 642 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms