RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SYCE2Q6PIF2 218 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 AOPEPQ8N6M6 819 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 PTCD3Q96EY7 689 aaKnown RBP4.93□□□□□ -1.62
SPG11-218ENST00000559754 ZNF764Q96H86 408 aaPredicted RBP4.93□□□□□ -1.62
SPG11-218ENST00000559754 POLR3GLQ9BT43 218 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
SPG11-218ENST00000559754 LRIT1Q9P2V4 623 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 TUBD1Q9UJT1 453 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 TLK1Q9UKI8 766 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 CCDC78A2IDD5 438 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 C5AR1P21730 350 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 CLK3P49761 638 aaKnown RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 ELLP55199 621 aaPredicted RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 MRPS35P82673 323 aaKnown RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 TARDBPQ13148 414 aaKnown RBP eCLIP4.92□□□□□ -1.62
SPG11-218ENST00000559754 SP5Q6BEB4 398 aaPredicted RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 GADL1Q6ZQY3 521 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 RD3Q7Z3Z2 195 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 LNX2Q8N448 690 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 SIMC1Q8NDZ2 872 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 IL17RDQ8NFM7 739 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 NACC2Q96BF6 587 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 MTMR8Q96EF0 704 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 BBC3Q96PG8 261 aaPredicted RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 AIFM2Q9BRQ8 373 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 DUSP26Q9BV47 211 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 PACSIN1Q9BY11 444 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 BRINP2Q9C0B6 783 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 MAN1C1Q9NR34 630 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 KCTD5Q9NXV2 234 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 HSFX1Q9UBD0 423 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 PCDHA13Q9Y5I0 950 aa4.92□□□□□ -1.62
SPG11-218ENST00000559754 TTBK1Q5TCY1 1321 aaPredicted RBP4.92□□□□□ -1.62
SPG11-218ENST00000559754 GRM6O15303 877 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 HTRA2O43464 458 aaPredicted RBP4.91□□□□□ -1.62
SPG11-218ENST00000559754 FCER1AP12319 257 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 SLFN5Q08AF3 891 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 ZNF844Q08AG5 666 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 MTMR1Q13613 665 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 ZNF169Q14929 603 aaPredicted RBP4.91□□□□□ -1.62
SPG11-218ENST00000559754 PTPROQ16827 1216 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 CCDC142Q17RM4 750 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 ABCB5Q2M3G0 1257 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 CLNKQ7Z7G1 428 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 PNMA8AQ86V59 439 aaPredicted RBP4.91□□□□□ -1.62
SPG11-218ENST00000559754 DCBLD1Q8N8Z6 715 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 IFI44Q8TCB0 444 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 HEPHQ9BQS7 1158 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 JKAMPQ9P055 326 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 IPPQ9Y573 584 aa4.91□□□□□ -1.62
SPG11-218ENST00000559754 A0A1W2PS29 197 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 ORC4O43929 436 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 PEX1O43933 1283 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 MARCH6O60337 910 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 AGFG2O95081 481 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 ANXA1P04083 346 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 IBSPP21815 317 aaPredicted RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 PLA2G5P39877 138 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 IGBP1P78318 339 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 MRPS21P82921 87 aaKnown RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 KIF23Q02241 960 aaPredicted RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 PIGFQ07326 219 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 UTP14CQ5TAP6 766 aaKnown RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 EFCAB2Q5VUJ9 269 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 FBXO42Q6P3S6 717 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 ZNF365Q70YC5 407 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 ACTRT2Q8TDY3 377 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 COA7Q96BR5 231 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 CLPTM1LQ96KA5 538 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 TEKT5Q96M29 485 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 METTL14Q9HCE5 456 aaKnown RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 CFAP20Q9Y6A4 193 aaKnown RBP4.9□□□□□ -1.63
SPG11-218ENST00000559754 SPATA31A6Q5VVP1 1343 aa4.9□□□□□ -1.63
SPG11-218ENST00000559754 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 CCDC154A6NI56 674 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 GABRDO14764 452 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA12O60330 932 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 SLC43A1O75387 559 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 KCNA2P16389 499 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 FOLR3P41439 243 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 RARRES1P49788 294 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 CDKN1CP49918 316 aaPredicted RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 ADKP55263 362 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 SIM1P81133 766 aaPredicted RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 TLE1Q04724 770 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 IL10RAQ13651 578 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 NOL8Q76FK4 1167 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 TTC7BQ86TV6 843 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 BOLLQ8N9W6 283 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 Q8NA96 180 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 ZCRB1Q8TBF4 217 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 SSH3Q8TE77 659 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms