RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ALPK3Q96L96 1907 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 PITPNM1O00562 1244 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 NDUFA10O95299 355 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ABL1P00519 1130 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 SERPING1P05155 500 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ACO1P21399 889 aaKnown RBP18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 RFX1P22670 979 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ASPAP45381 313 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 GCNT1Q02742 428 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 GFPT1Q06210 699 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 CUL2Q13617 745 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 WDR44Q5JSH3 913 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 USP38Q8NB14 1042 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 SLC20A1Q8WUM9 679 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 AGAP1Q9UPQ3 857 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 SQORQ9Y6N5 450 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 A0A0U1RQF3 1178 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 CYP26A1O43174 497 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 NRDCO43847 1150 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 ITGA4P13612 1032 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 CLCN1P35523 988 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 KIF11P52732 1056 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 DBF4BQ8NFT6 615 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 PPP1R13BQ96KQ4 1090 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 NXF1Q9UBU9 619 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 EPN1Q9Y6I3 576 aaPredicted RBP18.62■□□□□ 0.57
CHRNA3-206ENST00000559658 TDRD15B5MCY1 1934 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 TLR3O15455 904 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 KCNE1P15382 129 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 ITGB8P26012 769 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 KCNJ6P48051 423 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 MFAP3P55082 362 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 C1orf53Q5VUE5 145 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 SLC47A2Q86VL8 602 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 PALB2Q86YC2 1186 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 CD302Q8IX05 232 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 REXO1L1PQ8IX06 675 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 FAM71AQ8IYT1 594 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 ANKLE1Q8NAG6 615 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 VWCEQ96DN2 955 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 SDCBP2Q9H190 292 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 SMYD3Q9H7B4 428 aa18.61■□□□□ 0.57
CHRNA3-206ENST00000559658 A0A087X0T9 212 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 ARL5CA6NH57 179 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 WEE2P0C1S8 567 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 FAM228BP0C875 321 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 CD58P19256 250 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 EN2P19622 333 aaPredicted RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 PRKCIP41743 596 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 SCNN1GP51170 649 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 NAB2Q15742 525 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 MRPL10Q7Z7H8 261 aaKnown RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNF598Q86UK7 904 aaKnown RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 ECHDC2Q86YB7 292 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 UBR7Q8N806 425 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 LNX1Q8TBB1 728 aaPredicted RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 RABGGTAQ92696 567 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 TOX2Q96NM4 488 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 PPP1R10Q96QC0 940 aaKnown RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 SYT11Q9BT88 431 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 TRAIPQ9BWF2 469 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 NIF3L1Q9GZT8 377 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 ITGA11Q9UKX5 1188 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 DERAQ9Y315 318 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 C9IYK1 514 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 KRT5P13647 590 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 CDH8P55286 799 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 SGSM1Q2NKQ1 1148 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 WDR72Q3MJ13 1102 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 PLEKHG4Q58EX7 1191 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 NOP9Q86U38 636 aaKnown RBP18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 IMPG2Q9BZV3 1241 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 RGS18Q9NS28 235 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 TRIM10Q9UDY6 481 aa18.6■□□□□ 0.57
CHRNA3-206ENST00000559658 LAMA2P24043 3122 aaKnown RBP18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNF500O60304 480 aaPredicted RBP18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNF623O75123 536 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 FERP16591 822 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 C9orf57Q5W0N0 161 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 HPDLQ96IR7 371 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 TMEM106CQ9BVX2 250 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 DEF6Q9H4E7 631 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 HMGXB4Q9UGU5 601 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 NOCTQ9UK39 431 aaKnown RBP18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 MICAL3Q7RTP6 2002 aa18.59■□□□□ 0.57
CHRNA3-206ENST00000559658 SSU72P8A0A1W2PR75 194 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 SPTLC1O15269 473 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 AKR1B10O60218 316 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms