RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 OR6B2Q6IFH4 312 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 RNF34Q969K3 372 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PGM2Q96G03 612 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 NSL1Q96IY1 281 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 KIFC3Q9BVG8 833 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 OSBPL8Q9BZF1 889 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 OSBPL7Q9BZF2 842 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 RHBDL2Q9NX52 303 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 WHRNQ9P202 907 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 XPO7Q9UIA9 1087 aaKnown RBP7.5□□□□□ -1.21
USP3-210ENST00000559192 CNOT7Q9UIV1 285 aaKnown RBP7.5□□□□□ -1.21
USP3-210ENST00000559192 GGA2Q9UJY4 613 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 MRC1P22897 1456 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 RGPD8O14715 1765 aaPredicted RBP7.5□□□□□ -1.21
USP3-210ENST00000559192 BAZ2BQ9UIF8 2168 aaKnown RBP7.5□□□□□ -1.21
USP3-210ENST00000559192 E2F8A0AVK6 867 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 A6NJR5 290 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PIK3R2O00459 728 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PPIP5K2O43314 1243 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 RARAP10276 462 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 ATP4AP20648 1035 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 KCNA4P22459 653 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 CNGA1P29973 690 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 ATXN3P54252 364 aaPredicted RBP7.5□□□□□ -1.21
USP3-210ENST00000559192 IL1RL1Q01638 556 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PTK7Q13308 1070 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PRKG1Q13976 671 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 ICA1LQ8NDH6 482 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 PWWP2AQ96N64 755 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 OLFM3Q96PB7 478 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 ERVK-5Q9HDB9 667 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 UBAP1Q9NZ09 502 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 AFG3L2Q9Y4W6 797 aa7.5□□□□□ -1.21
USP3-210ENST00000559192 YWHABP31946 246 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 RFC5P40937 340 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 AUHQ13825 339 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 HIC1Q14526 733 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 RPS6KA2Q15349 733 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 SMTNL2Q2TAL5 461 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 C3orf62Q6ZUJ4 267 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PRPF39Q86UA1 669 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 SCFD2Q8WU76 684 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ATXN2LQ8WWM7 1075 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 PARVAQ9NVD7 372 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 H0YCG3 227 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PRPSAP2O60256 369 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 SNX3O60493 162 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 SNUPNO95149 360 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 HSPA4LO95757 839 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 ALDH1B1P30837 517 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 DEUP1Q05D60 604 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CBWD6Q4V339 395 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CBWD3Q5JTY5 395 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CBWD5Q5RIA9 395 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 GPD1LQ8N335 351 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 ATP6V0A1Q93050 837 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CENPTQ96BT3 561 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 FAM81BQ96LP2 452 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 ADPGKQ9BRR6 497 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 RANBP17Q9H2T7 1088 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 CNGB3Q9NQW8 809 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PAPOLBQ9NRJ5 636 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 NINJ2Q9NZG7 142 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 RGPD1P0DJD0 1748 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ARHGAP10A1A4S6 786 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 DAB1O75553 588 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 NOL4O94818 638 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 LCA5LO95447 670 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CALCAP01258 141 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CHKAP35790 457 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PLA2G4FQ68DD2 849 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PRUNE1Q86TP1 453 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 GFM2Q969S9 779 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 SENP1Q9P0U3 644 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ZBTB39O15060 712 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 BBOX1O75936 387 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 TRPC1P48995 793 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 SLC12A3P55017 1021 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 GEMIN4P57678 1058 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 TSPY1Q01534 308 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ROR1Q01973 937 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 CENPCQ03188 943 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 ART3Q13508 389 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 PPP6R3Q5H9R7 873 aaPredicted RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 ZBTB41Q5SVQ8 909 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 JADE1Q6IE81 842 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 DCLK2Q8N568 766 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 RBM46Q8TBY0 533 aaKnown RBP7.49□□□□□ -1.21
USP3-210ENST00000559192 SLC35C1Q96A29 364 aa7.49□□□□□ -1.21
USP3-210ENST00000559192 FAM111AQ96PZ2 611 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms