RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 RHOBTB3O94955 611 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 LDHAP00338 332 aaKnown RBP14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 CYP3A5P20815 502 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 FGFR3P22607 806 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 LRPAP1P30533 357 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 MCM4P33991 863 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 CLCN4P51793 760 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 AAK1Q2M2I8 961 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 C9orf57Q5W0N0 161 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 TMEM184AQ6ZMB5 413 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 CD302Q8IX05 232 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 BEST2Q8NFU1 509 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 DPP3Q9NY33 737 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 PCDHA5Q9Y5H7 936 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 VWA8A3KMH1 1905 aa14.99□□□□□ -0.01
TSPAN3-205ENST00000558745 TFAMQ00059 246 aaKnown RBP14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 PSMD5Q16401 504 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 PIK3R5Q8WYR1 880 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 POP1Q99575 1024 aaKnown RBP14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 S1PR5Q9H228 398 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 KCTD10Q9H3F6 313 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 STK39Q9UEW8 545 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 SSX2IPQ9Y2D8 614 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 UBE4BO95155 1302 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 PTPRJQ12913 1337 aa14.98□□□□□ -0.01
TSPAN3-205ENST00000558745 ZNF233A6NK53 670 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 PIRO00625 290 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 IL18RAPO95256 599 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 OR1D2P34982 312 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 ELAVL2Q12926 359 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 KCNB1Q14721 858 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 VARS2Q5ST30 1063 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 RARS2Q5T160 578 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 XXYLT1Q8NBI6 393 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 OR5B17Q8NGF7 314 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 CASP10Q92851 521 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 FBXL18Q96ME1 805 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 TIGD1Q96MW7 591 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 LRFN3Q9BTN0 628 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 DERAQ9Y315 318 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 C2CD2Q9Y426 696 aa14.97□□□□□ -0.01
TSPAN3-205ENST00000558745 ANO9A1A5B4 782 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 TGM5O43548 720 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 XPOTO43592 962 aaKnown RBP14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 TRAPPC3O43617 180 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 ADH1AP07327 375 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 CASP4P49662 377 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 ARPP19P56211 112 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 LILRA4P59901 499 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 POU5F1Q01860 360 aaKnown RBP14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 SNRNP35Q16560 246 aaKnown RBP14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 LILRA6Q6PI73 481 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 TMC5Q6UXY8 1006 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 DSTYKQ6XUX3 929 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 SMRP1Q8NCR6 262 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 PLEKHO2Q8TD55 490 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 CCDC127Q96BQ5 260 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 SUSD3Q96L08 255 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 CD320Q9NPF0 282 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 FNIP2Q9P278 1114 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 USP15Q9Y4E8 981 aaPredicted RBP14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 CDY1Q9Y6F8 540 aa14.96□□□□□ -0.01
TSPAN3-205ENST00000558745 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 EXOC3O60645 756 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 RFPL2O75678 378 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 ITGB3P05106 788 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 CDR1P51861 262 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 TMEM31Q5JXX7 168 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 C1orf127Q8N9H9 656 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 CXorf38Q8TB03 319 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 ZNF516Q92618 1163 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 SMARCE1Q969G3 411 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 BORCS6Q96GS4 357 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 SENP8Q96LD8 212 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 TSPAN18Q96SJ8 248 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 MTMR12Q9C0I1 747 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 MAN1C1Q9NR34 630 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 DMAC2Q9NW81 257 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 MTRRQ9UBK8 725 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 AGAP1Q9UPQ3 857 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 SCN1AP35498 2009 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 PLXNA3P51805 1871 aa14.95□□□□□ -0.02
TSPAN3-205ENST00000558745 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 M0QZQ0 153 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 PDXKO00764 312 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 GLUD1P00367 558 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 NR3C1P04150 777 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 KRT19P08727 400 aa14.94□□□□□ -0.02
TSPAN3-205ENST00000558745 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms