RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 USP20Q9Y2K6 914 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 ZMYM2Q9UBW7 1377 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 FAM170BA6NMN3 283 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 ZNF165P49910 485 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 STX1AQ16623 288 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 RSPO4Q2I0M5 234 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 LIN9Q5TKA1 542 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 MAEAQ7L5Y9 396 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 KCNK18Q7Z418 384 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 SNX29Q8TEQ0 813 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 FZD8Q9H461 694 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 SNTG2Q9NY99 539 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 CCDC39Q9UFE4 941 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 MAN1B1Q9UKM7 699 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 POLIQ9UNA4 740 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 HOXA9P31269 272 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 PRKCQQ04759 706 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 CSTF1Q05048 431 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 DPYDQ12882 1025 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 ZNF528Q3MIS6 628 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 RSPO2Q6UXX9 243 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 MTSS1LQ765P7 747 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 ELOA2Q8IYF1 753 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 SLC7A14Q8TBB6 771 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 PLA2G2FQ9BZM2 168 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 DNMT3BQ9UBC3 853 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 FBXO4Q9UKT5 387 aa12.23□□□□□ -0.45
RABGGTA-204ENST00000558376 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 AP5Z1O43299 807 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 LAMTOR5O43504 91 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 NLRP12P59046 1061 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 RAB33AQ14088 237 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 KRT79Q5XKE5 535 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 CD300LGQ6UXG3 332 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 NPAS3Q8IXF0 933 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 ING5Q8WYH8 240 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 BSNDQ8WZ55 320 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 SMARCE1Q969G3 411 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 CALML4Q96GE6 196 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 OSBPL6Q9BZF3 934 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 LTB4R2Q9NPC1 389 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 ANO10Q9NW15 660 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
RABGGTA-204ENST00000558376 SHISA7A6NL88 538 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 XYLBO75191 536 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 MED24O75448 989 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 RECQL4O94761 1208 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 EDN1P05305 212 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 THP07101 528 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 SPATA31C1P0DKV0 1188 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 OR1D2P34982 312 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 CCT6AP40227 531 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 FZD5Q13467 585 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 MCM6Q14566 821 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 FAM187BQ17R55 369 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 NT5DC1Q5TFE4 455 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 EEF1DP3Q658K8 133 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 CATSPER3Q86XQ3 398 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 SMYD4Q8IYR2 804 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 SPATA20Q8TB22 786 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 CLDN23Q96B33 292 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 BLOC1S4Q9NUP1 217 aa12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 PRMT7Q9NVM4 692 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-204ENST00000558376 E9PMD0 336 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 POU2F2P09086 479 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 FGFR3P22607 806 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 IQCB1Q15051 598 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 TSSK4Q6SA08 328 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 NELL1Q92832 810 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 MCRS1Q96EZ8 462 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 CDK5RAP3Q96JB5 506 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 PRIMPOLQ96LW4 560 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 NCDNQ9UBB6 729 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 USP25Q9UHP3 1055 aa12.21□□□□□ -0.46
RABGGTA-204ENST00000558376 KMT2BQ9UMN6 2715 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 N4BP3O15049 544 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 SPTLC1O15269 473 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 LILRB5O75023 590 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 PFKPQ01813 784 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 ELAVL2Q12926 359 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 MORC3Q14149 939 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms