RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 SKIV2LQ15477 1246 aaKnown RBP18.09■□□□□ 0.49
PBX4-202ENST00000557978 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 KIAA0319Q5VV43 1072 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 CD300LGQ6UXG3 332 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.09■□□□□ 0.49
PBX4-202ENST00000557978 TAS1R1Q7RTX1 841 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 CEP57Q86XR8 500 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 CCDC127Q96BQ5 260 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 MKNK1Q9BUB5 465 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
PBX4-202ENST00000557978 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 CD44P16070 742 aaKnown RBP18.08■□□□□ 0.49
PBX4-202ENST00000557978 PNPLA4P41247 253 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 BRCC3P46736 316 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 NRIP1P48552 1158 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 CASP4P49662 377 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 AP3M2P53677 418 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 CREMQ03060 361 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 ANKRD40Q6AI12 368 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 KLHL10Q6JEL2 608 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 FOXR2Q6PJQ5 311 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 INTS8Q75QN2 995 aaKnown RBP18.08■□□□□ 0.49
PBX4-202ENST00000557978 ADGRD2Q7Z7M1 963 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 RBM23Q86U06 439 aaKnown RBP18.08■□□□□ 0.49
PBX4-202ENST00000557978 PARD3BQ8TEW8 1205 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 SUSD3Q96L08 255 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 ZNF560Q96MR9 790 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 CGRRF1Q99675 332 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 PCDHGC5Q9Y5F6 944 aa18.08■□□□□ 0.49
PBX4-202ENST00000557978 SPTBN5Q9NRC6 3674 aaKnown RBP18.08■□□□□ 0.48
PBX4-202ENST00000557978 C2CD2LO14523 706 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 SYN3O14994 580 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 LILRB3O75022 631 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 ITGB3P05106 788 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 KRT13P13646 458 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 FGFR3P22607 806 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 TAF6P49848 677 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 LILRA4P59901 499 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 ENPEPQ07075 957 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 DUSP6Q16828 381 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 FAM186BQ8IYM0 893 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 MLKLQ8NB16 471 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 NELFBQ8WX92 580 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 AUTS2Q8WXX7 1259 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 RIN2Q8WYP3 895 aaPredicted RBP18.07■□□□□ 0.48
PBX4-202ENST00000557978 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 IGFLR1Q9H665 355 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 COG5Q9UP83 839 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 TSC2P49815 1807 aa18.07■□□□□ 0.48
PBX4-202ENST00000557978 TRIM49BA6NDI0 452 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 AKAP3O75969 853 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 KRT19P08727 400 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 SRGAP2BP0DMP2 458 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 EPB41P11171 864 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 RBP5P82980 135 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 HYAL1Q12794 435 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PAK1Q13153 545 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 SV2CQ496J9 727 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 RTP2Q5QGT7 225 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 LMBRD2Q68DH5 695 aaPredicted RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 DSTYKQ6XUX3 929 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 ANKS3Q6ZW76 656 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PPFIBP1Q86W92 1011 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 CSGALNACT2Q8N6G5 542 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 EFHBQ8N7U6 833 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 APPL2Q8NEU8 664 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PIK3R5Q8WYR1 880 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PABPC5Q96DU9 382 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 RXFP1Q9HBX9 757 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 DACH1Q9UI36 760 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 AGAP1Q9UPQ3 857 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 I3L4J1 428 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 M0QZQ0 153 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 IKBKBO14920 756 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PER2O15055 1255 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 ADH1AP07327 375 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 IGFBP6P24592 240 aaPredicted RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 KLRC2P26717 231 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 POLR2BP30876 1174 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
PBX4-202ENST00000557978 PMS1P54277 932 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 CLDN10P78369 228 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PSMD5Q16401 504 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 CCDC183Q5T5S1 534 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 RBM43Q6ZSC3 357 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 TRAPPC11Q7Z392 1133 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 ZC3H3Q8IXZ2 948 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 LRRC52Q8N7C0 313 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 OR5B17Q8NGF7 314 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 LNX1Q8TBB1 728 aaPredicted RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 HLA-CQ95604 372 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 KLHL5Q96PQ7 755 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 POP1Q99575 1024 aaKnown RBP18.06■□□□□ 0.48
PBX4-202ENST00000557978 CTNND2Q9UQB3 1225 aa18.06■□□□□ 0.48
PBX4-202ENST00000557978 PTPRJQ12913 1337 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms