RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RILPL2Q969X0 211 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HVCN1Q96D96 273 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 RRP36Q96EU6 259 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 TOE1Q96GM8 510 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 DYDC2Q96IM9 177 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HRASLS5Q96KN8 279 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 PDCD2LQ9BRP1 358 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 OSBPL6Q9BZF3 934 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HAPLN2Q9GZV7 340 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 BCO1Q9HAY6 547 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 LRRC4CQ9HCJ2 640 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 TBC1D23Q9NUY8 699 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 SIDT1Q9NXL6 827 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 ORC3Q9UBD5 711 aaPredicted RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 STOML1Q9UBI4 398 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 DBR1Q9UK59 544 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 ZDHHC8Q9ULC8 765 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ARHGAP26Q9UNA1 814 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 A0A1W2PR48 441 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 SYNDIG1LA6NDD5 238 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 PYCARD-AS1I3L0S3 204 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 F2RL2O00254 374 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 SRGAP3O43295 1099 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 RTN3O95197 1032 aaPredicted RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 ABHD16AO95870 558 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ZGLP1P0C6A0 271 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ZSCAN22P10073 491 aaPredicted RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 DDCP20711 480 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 GABRB3P28472 473 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ARL4AP40617 200 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 AARSP49588 968 aaKnown RBP eCLIP4.32□□□□□ -1.72
TDP1-217ENST00000557782 MAN2A2P49641 1150 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 COPAP53621 1224 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ACTR2P61160 394 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 PFKPQ01813 784 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 EXOSC9Q06265 439 aaKnown RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 LRP8Q14114 963 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 MST1LQ2TV78 715 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 C19orf54Q5BKX5 351 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 FAM205BPQ63HN1 556 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 VASNQ6EMK4 673 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 CCDC129Q6ZRS4 1044 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 FAM43BQ6ZT52 329 aaPredicted RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 MICU3Q86XE3 530 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 KRT73Q86Y46 540 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 FAM126BQ8IXS8 530 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 SHISA5Q8N114 240 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 NKAIN3Q8N8D7 197 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 VGLL2Q8N8G2 317 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 GLIS1Q8NBF1 620 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ZMIZ2Q8NF64 920 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 TDRD7Q8NHU6 1098 aaKnown RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 PPP1R14CQ8TAE6 165 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 IGDCC4Q8TDY8 1250 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ADAMTS15Q8TE58 950 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 ZNF384Q8TF68 577 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 COG8Q96MW5 612 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 GDF15Q99988 308 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 C1orf43Q9BWL3 253 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 SMURF2Q9HAU4 748 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 A1CFQ9NQ94 594 aaKnown RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 KRT84Q9NSB2 600 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 USP40Q9NVE5 1235 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 HSPBP1Q9NZL4 362 aa4.32□□□□□ -1.72
TDP1-217ENST00000557782 CTDP1Q9Y5B0 961 aaPredicted RBP4.32□□□□□ -1.72
TDP1-217ENST00000557782 A0A0A6YYK5 440 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 FCHO1O14526 889 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 USO1O60763 962 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 RASSF9O75901 435 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ACTL6BO94805 426 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 INMTO95050 263 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 LY86O95711 162 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 LRG1P02750 347 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CYBBP04839 570 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CD1AP06126 327 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SLC3A2P08195 630 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 HSP90AB1P08238 724 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 DBHP09172 617 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 TXNP10599 105 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 NPPBP16860 134 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ALOX12P18054 663 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 HDCP19113 662 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CHMP24386 653 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 IL1R2P27930 398 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 GALNSP34059 522 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SREBF1P36956 1147 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 STAT1P42224 750 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 NPTX2P47972 431 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CASP6P55212 293 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 RNASE9P60153 205 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 CTXN1P60606 82 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ARF3P61204 181 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 AP2B1P63010 937 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 POU6F2P78424 691 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 ARF1P84077 181 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 MXRA7P84157 204 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms