RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SAYSD1Q9NPB0 183 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 HAO1Q9UJM8 370 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 GTF2H1P32780 548 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 ECE1P42892 770 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 PDK4Q16654 411 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 P3H1Q32P28 736 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 PRUNE1Q86TP1 453 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 LRRC42Q9Y546 428 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 EDF1O60869 148 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 PEX11AO75192 247 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KRT15P19012 456 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KLRC2P26717 231 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 ADSSP30520 456 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 CETN2P41208 172 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 CCNHP51946 323 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 GCNT1Q02742 428 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 NAIF1Q69YI7 327 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 FAM13CQ8NE31 585 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 FAM118BQ9BPY3 351 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 FAM167BQ9BTA0 163 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KIF3CO14782 793 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 LYPLA2O95372 231 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 ITGB5P18084 799 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 GCAP28676 217 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 RAD23BP54727 409 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 WASHC2DQ5SRD0 308 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 ANKS1BQ7Z6G8 1248 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 LONP2Q86WA8 852 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
VIPAS39-211ENST00000557658 CALCAP01258 141 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 FDX1P10109 184 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 CNGA1P29973 690 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 ABL2P42684 1182 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 AOC3Q16853 763 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 TBC1D10BQ4KMP7 808 aaPredicted RBP12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 HHATQ5VTY9 493 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 SV2AQ7L0J3 742 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 EXD1Q8NHP7 514 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 MFSD14AQ96MC6 490 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 C8orf37Q96NL8 207 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 OSBPL1AQ9BXW6 950 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 ZFATQ9P243 1243 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 TMX2Q9Y320 296 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 UMODL1Q5DID0 1318 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 MYPNQ86TC9 1320 aa12.52□□□□□ -0.4
VIPAS39-211ENST00000557658 A6NHS1 94 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 DNALI1O14645 258 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ENTPD3O75355 529 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 TPBGLP0DKB5 382 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 CA4P22748 312 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 BPIFB4P59827 614 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 CMPK2Q5EBM0 449 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 FAM102BQ5T8I3 360 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 TRIM68Q6AZZ1 485 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 MAP4K3Q8IVH8 894 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 C10orf82Q8WW14 230 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms