RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF543Q08ER8 600 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 DAG1Q14118 895 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 GRM7Q14831 915 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 GADL1Q6ZQY3 521 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 LCNL1Q6ZST4 164 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 KRT28Q7Z3Y7 464 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 MICU3Q86XE3 530 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 FITM2Q8N6M3 262 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 Q8NA96 180 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 BRIX1Q8TDN6 353 aaKnown RBP2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ST8SIA2Q92186 375 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 PMM1Q92871 262 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 FAM89AQ96GI7 184 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ZDHHC12Q96GR4 267 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 BOD1Q96IK1 185 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 SPATA5L1Q9BVQ7 753 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ADAM7Q9H2U9 754 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 TM7SF3Q9NS93 570 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 TRMT13Q9NUP7 481 aaKnown RBP2.15□□□□□ -2.07
HIF1A-212ENST00000557538 PGAP2Q9UHJ9 254 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 TPCN1Q9ULQ1 816 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 PCDHA13Q9Y5I0 950 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 XDHP47989 1333 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ADSLP30566 484 aaPredicted RBP2.15□□□□□ -2.07
HIF1A-212ENST00000557538 MXRA7P84157 204 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 FMO1Q01740 532 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 EFEMP1Q12805 493 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 HABP2Q14520 560 aaPredicted RBP2.15□□□□□ -2.07
HIF1A-212ENST00000557538 SPTY2D1Q68D10 685 aaPredicted RBP2.15□□□□□ -2.07
HIF1A-212ENST00000557538 RSPH3Q86UC2 560 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 SDR16C5Q8N3Y7 309 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 TMX3Q96JJ7 454 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 MOGAT1Q96PD6 335 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ANP32EQ9BTT0 268 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 MRI1Q9BV20 369 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 SERHLQ9NQF3 203 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ETAA1Q9NY74 926 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ZMYM3Q14202 1370 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 MYADML2A6NDP7 307 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ERN1O75460 977 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FGF18O76093 207 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 HAUS5O94927 633 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ABHD16AO95870 558 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SMARCA1P28370 1054 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SLC6A4P31645 630 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ALDH1A3P47895 512 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SLFN5Q08AF3 891 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 IFIT5Q13325 482 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 IZUMO3Q5VZ72 239 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 AFMIDQ63HM1 303 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 RHOUQ7L0Q8 258 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 CIR1Q86X95 450 aaPredicted RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 RHOT1Q8IXI2 618 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FUKQ8N0W3 1084 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 Q8TCH9 128 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SGCZQ96LD1 299 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 OSBPL9Q96SU4 736 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 MYD88Q99836 296 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SARS2Q9NP81 518 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 NR2E3Q9Y5X4 410 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ACTL7AQ9Y615 435 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ABHD14A-ACY1A0A1B0GW23 586 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 A0A1W2PPC4 97 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 A0A1W2PS29 197 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 NPEPPSL1A6NEC2 478 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 DRGXA6NNA5 263 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 B4GALT4O60513 344 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 INMTO95050 263 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 PER3P56645 1201 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FOXO1Q12778 655 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FOXL1Q12952 345 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 UBXN2BQ14CS0 331 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TCTN3Q6NUS6 607 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 PPP1R3BQ86XI6 285 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ADGRG2Q8IZP9 1017 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FAM109AQ8N4B1 249 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 OR14K1Q8NGZ2 314 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 RSC1A1Q92681 617 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TIFAQ96CG3 184 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SLC35A4Q96G79 324 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 BRIP1Q9BX63 1249 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 KRTAP3-1Q9BYR8 98 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 BRD9Q9H8M2 597 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 KIAA1586Q9HCI6 787 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 USP40Q9NVE5 1235 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 RIPOR2Q9Y4F9 1068 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TMEM200CA6NKL6 621 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 HNRNPDLO14979 420 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 PROM1O43490 865 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 FOXS1O43638 330 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TSHRP16473 764 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SELENOPP49908 381 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 EFR3AQ14156 821 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 GPR155Q7Z3F1 870 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 SESTD1Q86VW0 696 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TMPRSS6Q8IU80 811 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 VGLL2Q8N8G2 317 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ARL8AQ96BM9 186 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 TMEM41AQ96HV5 264 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 WWC2-AS2Q96NR7 200 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms